Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G141900.1 | Wheat | plastid | 97.78 | 48.09 |
| HORVU5Hr1G043460.1 | Barley | plastid | 87.78 | 43.17 |
| Bra016936.1-P | Field mustard | cytosol | 47.78 | 40.95 |
| Os11t0141400-01 | Rice | cytosol | 81.11 | 38.83 |
| KXG27695 | Sorghum | plastid | 81.11 | 37.06 |
| Zm00001d004972_P001 | Maize | plastid | 75.56 | 36.36 |
| Os12t0138050-00 | Rice | plastid | 80.0 | 30.25 |
| TraesCS5B01G342800.1 | Wheat | cytosol | 43.33 | 24.07 |
| TraesCS3B01G538300.1 | Wheat | cytosol, plastid | 50.0 | 23.68 |
| TraesCS3B01G536200.1 | Wheat | cytosol, plastid | 50.0 | 23.68 |
| TraesCS3B01G536600.1 | Wheat | nucleus, plastid | 51.11 | 23.35 |
| TraesCS1B01G148000.1 | Wheat | cytosol | 44.44 | 23.26 |
| TraesCS1B01G250900.1 | Wheat | mitochondrion | 47.78 | 22.75 |
| AT3G10190.1 | Thale cress | cytosol, mitochondrion | 51.11 | 22.01 |
| TraesCS3B01G045500.1 | Wheat | cytosol | 45.56 | 21.93 |
| CDY60169 | Canola | cytosol, plastid | 50.0 | 21.63 |
| Bra029821.1-P | Field mustard | plastid | 50.0 | 21.63 |
| KRG95139 | Soybean | plastid | 51.11 | 21.1 |
| KRH66816 | Soybean | plastid | 51.11 | 21.0 |
| VIT_08s0007g05790.t01 | Wine grape | mitochondrion, plastid | 51.11 | 20.72 |
| Bra004620.1-P | Field mustard | cytosol, mitochondrion, plastid | 48.89 | 20.66 |
| CDY23852 | Canola | cytosol, mitochondrion, plastid | 48.89 | 20.66 |
| CDX79938 | Canola | cytosol, mitochondrion, plastid | 48.89 | 20.66 |
| CDY00910 | Canola | cytosol, plastid | 50.0 | 20.64 |
| PGSC0003DMT400021079 | Potato | cytosol, mitochondrion, plastid | 46.67 | 20.49 |
| Solyc10g079420.1.1 | Tomato | nucleus, plastid | 46.67 | 20.49 |
| PGSC0003DMT400076709 | Potato | mitochondrion | 47.78 | 20.38 |
| TraesCS5B01G237500.1 | Wheat | mitochondrion | 41.11 | 20.22 |
| TraesCS2B01G367500.1 | Wheat | plastid | 47.78 | 20.09 |
| CDY06925 | Canola | cytosol, mitochondrion, plastid | 47.78 | 19.82 |
| CDY14768 | Canola | cytosol, mitochondrion, plastid | 47.78 | 19.82 |
| TraesCS4B01G172400.1 | Wheat | plastid | 41.11 | 19.58 |
| AT2G41410.1 | Thale cress | cytosol, mitochondrion, plastid | 46.67 | 19.44 |
| TraesCS2B01G120900.1 | Wheat | plastid | 41.11 | 19.37 |
| TraesCS7B01G206200.1 | Wheat | plastid | 41.11 | 18.69 |
| PGSC0003DMT400027581 | Potato | cytosol, plastid | 43.33 | 18.06 |
| GSMUA_Achr8P00110_001 | Banana | endoplasmic reticulum, golgi | 57.78 | 18.06 |
| Solyc04g018110.1.1 | Tomato | plastid | 43.33 | 16.12 |
| TraesCS7B01G034000.1 | Wheat | endoplasmic reticulum | 41.11 | 15.81 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G134200.1 | EnsemblPlantsGene:TraesCS5B01G134200 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR10891 | PANTHER:PTHR10891:SF739 |
| PFAM:PF13499 | PFscan:PS50222 | ScanProsite:PS00018 | SEG:seg | SMART:SM00054 | SUPFAM:SSF47473 |
| TIGR:cd00051 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr5B:-:251343525..251343797
Molecular Weight (calculated)
9592.4 Da
IEP (calculated)
3.854
GRAVY (calculated)
0.097
Length
90 amino acids
Sequence
(BLAST)
(BLAST)
1: MLAEAEAGLA LEGIVAAEVA DEGELRDTFA VFDADGDGRI SAKELRAVLA SLGDERCSVE DCRRMIGGVD TDGDGFVCFN EFTRMMMLAP
001: MKLAKLIPKR FFIRSKDRST VSKSPTAFSF GSASSSSGQD CKNSGGDGGG GSVTPTSILP EVPSPYSYVE ILQAFKLIDR DNDGAVSRHD LESLLSRLGP
101: DPLTEEEINV MLKEVDCDGD GTIRLEELAS RVVSLDPARD STELKETFEF FDADRDGLIS ADELLRVFST IGDERCTLDD CKRMIADVDE DGDGFVCFTE
201: FSRMMDLQR
101: DPLTEEEINV MLKEVDCDGD GTIRLEELAS RVVSLDPARD STELKETFEF FDADRDGLIS ADELLRVFST IGDERCTLDD CKRMIADVDE DGDGFVCFTE
201: FSRMMDLQR
Arabidopsis Description
CML36Probable calcium-binding protein CML36 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS31]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.