Factsheet for Solyc10g079420.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 4
nucleus 2
plasma membrane 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400021079	Potato	cytosol, mitochondrion, plastid	97.07	97.07
VIT_08s0007g05790.t01	Wine grape	mitochondrion, plastid	61.95	57.21
Bra016936.1-P	Field mustard	cytosol	28.78	56.19
Solyc04g018110.1.1	Tomato	plastid	64.39	54.55
CDY06925	Canola	cytosol, mitochondrion, plastid	51.22	48.39
CDY14768	Canola	cytosol, mitochondrion, plastid	50.24	47.47
CDY23852	Canola	cytosol, mitochondrion, plastid	49.27	47.42
TraesCS5B01G134200.1	Wheat	cytosol	20.49	46.67
Bra004620.1-P	Field mustard	cytosol, mitochondrion, plastid	48.29	46.48
CDX79938	Canola	cytosol, mitochondrion, plastid	48.29	46.48
AT3G10190.1	Thale cress	cytosol, mitochondrion	47.32	46.41
Bra029821.1-P	Field mustard	plastid	46.83	46.15
CDY60169	Canola	cytosol, plastid	46.34	45.67
CDY00910	Canola	cytosol, plastid	48.29	45.41
KRG95139	Soybean	plastid	48.29	45.41
KRH66816	Soybean	plastid	47.32	44.29
AT2G41410.1	Thale cress	cytosol, mitochondrion, plastid	46.34	43.98
GSMUA_Achr8P09680_001	Banana	plastid	40.0	40.59
HORVU5Hr1G043460.1	Barley	plastid	36.1	40.44
Solyc02g063350.1.1	Tomato	cytosol	28.29	40.0
TraesCS5D01G141900.1	Wheat	plastid	35.61	39.89
Solyc06g083000.1.1	Tomato	cytosol	28.78	39.6
Solyc02g091500.1.1	Tomato	cytosol	29.27	38.46
Solyc01g005370.2.1	Tomato	cytosol	31.71	37.79
Solyc09g055880.1.1	Tomato	cytosol	27.32	37.33
Solyc05g050750.1.1	Tomato	cytosol, unclear	27.32	37.33
Solyc06g068960.1.1	Tomato	endoplasmic reticulum, unclear	27.8	37.01
EES02048	Sorghum	plastid	33.66	36.13
TraesCS3A01G488700.1	Wheat	nucleus, plastid	33.66	35.94
Zm00001d042108_P001	Maize	cytosol, plastid	33.66	35.94
EES16521	Sorghum	plastid	37.07	35.51
TraesCS3D01G484600.1	Wheat	cytosol, plastid	33.66	35.38
Solyc04g008000.2.1	Tomato	cytosol, plastid	32.68	35.08
TraesCS3B01G536600.1	Wheat	nucleus, plastid	33.66	35.03
Zm00001d004972_P001	Maize	plastid	31.71	34.76
Os11t0141400-01	Rice	cytosol	31.71	34.57
Os01t0949300-01	Rice	plasma membrane	34.15	34.31
Solyc03g118810.1.1	Tomato	cytosol	26.83	33.54
KXG27695	Sorghum	plastid	32.2	33.5
Solyc11g044920.1.1	Tomato	cytosol	19.02	32.23
GSMUA_Achr8P00110_001	Banana	endoplasmic reticulum, golgi	43.9	31.25
Solyc02g065000.1.1	Tomato	cytosol	25.85	30.64
Os12t0138050-00	Rice	plastid	34.15	29.41
Solyc01g108190.2.1	Tomato	plastid	25.37	28.11
HORVU3Hr1G106950.3	Barley	cytosol	33.66	25.56
Solyc07g007950.1.1	Tomato	endoplasmic reticulum, extracellular, golgi	25.85	23.87
Solyc10g074740.1.1	Tomato	cytosol, plastid	20.0	20.6

Protein Annotations

EnsemblPlants:Solyc10g079420.1.1	EnsemblPlantsGene:Solyc10g079420.1	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR10891	PANTHER:PTHR10891:SF739
PFAM:PF13499	PFscan:PS50222	ScanProsite:PS00018	SEG:seg	SMART:SM00054	SUPFAM:SSF47473
UniParc:UPI000276A705	UniProt:K4D2I3	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr10:+:60957950..60958567

Molecular Weight (calculated)

22605.4 Da

IEP (calculated)

4.344

GRAVY (calculated)

-0.430

Length

205 amino acids

Sequence
(BLAST)

001: MKLITDLPKK LFKSKKKRSI SRSENTSFGS VTTSSSSSGS VTTPTSVLPS TNTQWPSEIS AEVYSELVQA FQMIDGDGDG KIHKEELSAI LTRVGSDPPT
101: EEELVQLLNE VDVNGDGCIS LQEFGAISSA FGPPSCDSEM RDTFEFFDAN HDGKITAEEL FNVFRTIGDG RCTLEECRRM IRGVDKNGDG FVCFEDFSLM
201: MEQQR

Best Arabidopsis Sequence Match ( AT3G10190.1 )
(BLAST)

001: MKLAKLIPKR FFIRSKDRST VSKSPTAFSF GSASSSSGQD CKNSGGDGGG GSVTPTSILP EVPSPYSYVE ILQAFKLIDR DNDGAVSRHD LESLLSRLGP
101: DPLTEEEINV MLKEVDCDGD GTIRLEELAS RVVSLDPARD STELKETFEF FDADRDGLIS ADELLRVFST IGDERCTLDD CKRMIADVDE DGDGFVCFTE
201: FSRMMDLQR

Arabidopsis Description

CML36Probable calcium-binding protein CML36 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS31]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.