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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • plastid 3
  • mitochondrion 2
  • cytosol 1
  • nucleus 2
Predictors GFP MS/MS Papers
Winner Takes All:nucleus, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Predotar:mitochondrion
PProwler:plastid
TargetP:plastid
WoLF PSORT:nucleus
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G427400.1
TraesCS1B01G462300.1
TraesCS1D01G437100.1
TraesCS3A01G143000.1
TraesCS3A01G221800.1
TraesCS3B01G162100.1
TraesCS3B01G251600.1
TraesCS3D01G144600.1
TraesCS3D01G231300.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G41410.1 TraesCS1A01G427400.1 AT2G42580.1 19000166
AT2G41410.1 TraesCS1B01G462300.1 AT2G42580.1 19000166
AT2G41410.1 TraesCS1D01G437100.1 AT2G42580.1 19000166
AT2G41410.1 TraesCS3A01G143000.1 AT2G42580.1 19000166
AT2G41410.1 TraesCS3A01G221800.1 AT2G42580.1 19000166
AT2G41410.1 TraesCS3B01G162100.1 AT2G42580.1 19000166
AT2G41410.1 TraesCS3B01G251600.1 AT2G42580.1 19000166
AT2G41410.1 TraesCS3D01G144600.1 AT2G42580.1 19000166
AT2G41410.1 TraesCS3D01G231300.1 AT2G42580.1 19000166
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G484600.1 Wheat cytosol, plastid 97.92 96.41
TraesCS3B01G536600.1 Wheat nucleus, plastid 97.4 94.92
Os01t0949300-01 Rice plasma membrane 79.17 74.51
EES02048 Sorghum plastid 70.83 71.2
Zm00001d042108_P001 Maize cytosol, plastid 68.75 68.75
HORVU3Hr1G106950.3 Barley cytosol 93.23 66.3
GSMUA_Achr8P09680_001 Banana plastid 45.83 43.56
CDY23852 Canola cytosol, mitochondrion, plastid 38.54 34.74
KRH66816 Soybean plastid 39.58 34.7
PGSC0003DMT400076709 Potato mitochondrion 38.02 34.6
KRG95139 Soybean plastid 39.06 34.4
Bra016936.1-P Field mustard cytosol 18.75 34.29
CDX79938 Canola cytosol, mitochondrion, plastid 38.02 34.27
Bra004620.1-P Field mustard cytosol, mitochondrion, plastid 38.02 34.27
VIT_08s0007g05790.t01 Wine grape mitochondrion, plastid 39.06 33.78
PGSC0003DMT400021079 Potato cytosol, mitochondrion, plastid 35.94 33.66
Solyc10g079420.1.1 Tomato nucleus, plastid 35.94 33.66
CDY06925 Canola cytosol, mitochondrion, plastid 38.02 33.64
AT3G10190.1 Thale cress cytosol, mitochondrion 36.46 33.49
CDY14768 Canola cytosol, mitochondrion, plastid 37.5 33.18
AT2G41410.1 Thale cress cytosol, mitochondrion, plastid 36.46 32.41
CDY60169 Canola cytosol, plastid 34.38 31.73
Bra029821.1-P Field mustard plastid 33.85 31.25
CDY00910 Canola cytosol, plastid 34.38 30.28
TraesCS7A01G050500.1 Wheat cytosol 25.52 30.06
PGSC0003DMT400027581 Potato cytosol, plastid 33.33 29.63
Solyc04g018110.1.1 Tomato plastid 34.9 27.69
TraesCS1A01G134000.1 Wheat cytosol 24.48 27.33
TraesCS5A01G238900.1 Wheat mitochondrion 25.52 26.78
TraesCS3A01G488400.1 Wheat cytosol, plastid 26.56 26.7
TraesCS1A01G238800.1 Wheat mitochondrion 25.52 25.93
TraesCS4A01G436700.1 Wheat cytosol 23.44 25.86
TraesCS2A01G349100.1 Wheat plastid 28.65 25.58
TraesCS2A01G103600.1 Wheat plastid 25.0 25.13
TraesCS5A01G343000.1 Wheat cytosol, mitochondrion 21.35 25.0
TraesCS3A01G038300.1 Wheat cytosol 23.96 24.73
TraesCS4A01G132300.1 Wheat plastid 23.96 24.08
TraesCS7A01G306000.1 Wheat plastid 22.4 21.94
TraesCS7A01G133200.1 Wheat cytosol, mitochondrion, nucleus, plastid 28.65 16.27
Protein Annotations
EnsemblPlants:TraesCS3A01G488700.1EnsemblPlantsGene:TraesCS3A01G488700Gene3D:1.10.238.10GO:GO:0003674GO:GO:0005488GO:GO:0005509
InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_domInterPro:IPR002048PANTHER:PTHR10891PANTHER:PTHR10891:SF739
PFAM:PF13499PFscan:PS50222ScanProsite:PS00018SEG:segSMART:SM00054SUPFAM:SSF47473
TIGR:cd00051MapMan:35.2::::
Description
No Description!
Coordinates
chr3A:-:716523530..716524108
Molecular Weight (calculated)
20166.6 Da
IEP (calculated)
4.469
GRAVY (calculated)
-0.333
Length
192 amino acids
Sequence
(BLAST)
001: MKLSMQSLAR KLSIPSPKRG KKQQQQDGSG KRGISRSEAP SFASASSSST SSSSEDALPR ASTPRSVLPV EISRRELEAV LRRLGHEEPS DDELDAVAAI
101: AAAGEAGPED ELMEAFNVFD ADGDGRITAE ELRGVLLAIL GGEADGCSLD DCRRMIGGVD ADGDGFVGFQ DFARMMMVST AAATTSAGPR FL
Best Arabidopsis Sequence Match ( AT1G24620.1 )
(BLAST)
001: MFNKNQGSNG GSSSNVGIGA DSPYLQKARS GKTEIRELEA VFKKFDVNGD GKISSKELGA IMTSLGHEVP EEELEKAITE IDRKGDGYIN FEEFVELNTK
101: GMDQNDVLEN LKDAFSVYDI DGNGSISAEE LHEVLRSLGD ECSIAECRKM IGGVDKDGDG TIDFEEFKIM MTMGSRRDNV MGGGPR
Arabidopsis Description
CML25Probable calcium-binding protein CML25 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYK2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.