Factsheet for TraesCS4A01G436700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G050500.1	Wheat	cytosol	89.66	95.71
TraesCS7D01G045800.1	Wheat	cytosol	94.83	95.38
OQU78964	Sorghum	cytosol	69.54	73.33
Zm00001d023992_P001	Maize	cytosol	66.67	72.96
HORVU7Hr1G008910.2	Barley	cytosol	86.78	70.56
GSMUA_Achr2P05840_001	Banana	cytosol	58.05	67.33
GSMUA_Achr8P28890_001	Banana	cytosol	57.47	66.67
Solyc06g083000.1.1	Tomato	cytosol	56.9	66.44
GSMUA_Achr1P13420_001	Banana	cytosol	56.9	66.0
PGSC0003DMT400071189	Potato	cytosol	55.75	65.1
Os12t0228800-01	Rice	cytosol	62.64	64.88
CDY60818	Canola	cytosol	55.17	64.43
Bra040379.1-P	Field mustard	cytosol	55.17	64.43
GSMUA_Achr6P28770_001	Banana	cytosol	55.17	64.0
VIT_07s0289g00040.t01	Wine grape	cytosol	56.32	63.64
VIT_07s0141g00300.t01	Wine grape	cytosol	56.32	63.64
GSMUA_Achr3P16870_001	Banana	cytosol	54.6	62.91
AT3G07490.1	Thale cress	cytosol	55.17	62.75
Solyc09g055880.1.1	Tomato	cytosol	52.87	61.33
KRG95097	Soybean	cytosol	53.45	61.18
KRH66763	Soybean	cytosol	52.3	59.87
Bra001254.1-P	Field mustard	cytosol	52.3	59.48
CDY07993	Canola	cytosol	52.3	59.48
CDX74043	Canola	cytosol	51.72	58.82
GSMUA_Achr9P07990_001	Banana	endoplasmic reticulum, golgi, plastid	61.49	48.42
TraesCS2A01G349100.1	Wheat	plastid	54.02	43.72
TraesCS5A01G343000.1	Wheat	cytosol, mitochondrion	33.33	35.37
TraesCS2A01G103600.1	Wheat	plastid	37.36	34.03
TraesCS7A01G306000.1	Wheat	plastid	37.93	33.67
TraesCS3A01G488400.1	Wheat	cytosol, plastid	36.78	33.51
TraesCS1A01G238800.1	Wheat	mitochondrion	35.63	32.8
TraesCS4A01G132300.1	Wheat	plastid	35.63	32.46
TraesCS1A01G134000.1	Wheat	cytosol	30.46	30.81
TraesCS3A01G038300.1	Wheat	cytosol	31.61	29.57
TraesCS5A01G238900.1	Wheat	mitochondrion	28.74	27.32
TraesCS3A01G488700.1	Wheat	nucleus, plastid	25.86	23.44
TraesCS7A01G133200.1	Wheat	cytosol, mitochondrion, nucleus, plastid	43.1	22.19

Protein Annotations

EnsemblPlants:TraesCS4A01G436700.1	EnsemblPlantsGene:TraesCS4A01G436700	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR10891	PANTHER:PTHR10891:SF546
PFAM:PF13499	PFscan:PS50222	ScanProsite:PS00018	SEG:seg	SMART:SM00054	SUPFAM:SSF47473
TIGR:cd00051	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr4A:+:706537515..706538039

Molecular Weight (calculated)

19451.9 Da

IEP (calculated)

4.115

GRAVY (calculated)

-0.635

Length

174 amino acids

Sequence
(BLAST)

001: MQIERPRAEI MSSKRVDESE LRKVFQMFDK NGDGQVTKKE LSELLKNLGI YIAGDEMDAT MAKIDTNGDG CIDVEEFGLL YRSILDEGDG PNGGNMGDEE
101: EEMREAFSVF DQNGDGYITI EELWSVLASL GLKQGRTVEE CRQMINKVDV NGDGRVDFKE FSQMMRGGAA GRED

Best Arabidopsis Sequence Match ( AT2G43290.1 )
(BLAST)

001: MVRIFLLYNI LNSFLLSLVP KKLRTLFPLS WFDKTLHKNS PPSPSTMLPS PSSSSAPTKR IDPSELKRVF QMFDKNGDGR ITKEELNDSL ENLGIYIPDK
101: DLTQMIHKID ANGDGCVDID EFESLYSSIV DEHHNDGETE EEDMKDAFNV FDQDGDGFIT VEELKSVMAS LGLKQGKTLD GCKKMIMQVD ADGDGRVNYK
201: EFLQMMKGGG FSSSN

Arabidopsis Description

CML5MSS3 [Source:UniProtKB/TrEMBL;Acc:A0A178VP84]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.