Factsheet for GSMUA_Achr9P07990_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plastid

Predictor Summary:

plastid 4
nucleus 1
endoplasmic reticulum 3
plasma membrane 3
extracellular 2
vacuole 2
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, plastid
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P28890_001	Banana	cytosol	58.82	86.67
GSMUA_Achr1P13420_001	Banana	cytosol	57.92	85.33
GSMUA_Achr2P05840_001	Banana	cytosol	57.01	84.0
GSMUA_Achr3P16870_001	Banana	cytosol	56.11	82.12
VIT_07s0289g00040.t01	Wine grape	cytosol	57.01	81.82
VIT_07s0141g00300.t01	Wine grape	cytosol	57.01	81.82
PGSC0003DMT400071189	Potato	cytosol	53.39	79.19
GSMUA_Achr6P28770_001	Banana	cytosol	53.39	78.67
Solyc06g083000.1.1	Tomato	cytosol	52.94	78.52
AT3G07490.1	Thale cress	cytosol	53.39	77.12
CDY60818	Canola	cytosol	51.58	76.51
Bra040379.1-P	Field mustard	cytosol	51.58	76.51
Solyc09g055880.1.1	Tomato	cytosol	50.68	74.67
KRH66763	Soybean	cytosol	51.13	74.34
KRG95097	Soybean	cytosol	51.13	74.34
CDY07993	Canola	cytosol	51.13	73.86
Bra001254.1-P	Field mustard	cytosol	51.13	73.86
CDX74043	Canola	cytosol	50.68	73.2
Zm00001d023992_P001	Maize	cytosol	50.23	69.81
OQU78964	Sorghum	cytosol	51.58	69.09
TraesCS7A01G050500.1	Wheat	cytosol	47.96	65.03
Os12t0228800-01	Rice	cytosol	47.06	61.9
TraesCS7D01G045800.1	Wheat	cytosol	48.42	61.85
TraesCS4A01G436700.1	Wheat	cytosol	48.42	61.49
Os04t0492800-01	Rice	cytosol, mitochondrion, nucleus, plastid	49.77	56.12
HORVU7Hr1G008910.2	Barley	cytosol	51.58	53.27
TraesCS2B01G367500.1	Wheat	plastid	50.23	51.87
TraesCS2A01G349100.1	Wheat	plastid	49.32	50.7
TraesCS2D01G347500.1	Wheat	plastid	49.77	50.0
Zm00001d003197_P001	Maize	plastid	48.42	48.2
EES11048	Sorghum	plastid	50.68	47.06
GSMUA_Achr8P17950_001	Banana	cytosol, plastid	31.67	39.55
GSMUA_Achr8P01570_001	Banana	cytosol	32.58	38.92
GSMUA_Achr11P...	Banana	cytosol, plastid	29.41	37.79
GSMUA_Achr6P35120_001	Banana	endoplasmic reticulum	35.75	36.41
GSMUA_Achr8P09680_001	Banana	plastid	29.86	32.67
GSMUA_Achr6P09820_001	Banana	cytosol	30.77	26.05
GSMUA_Achr8P00110_001	Banana	endoplasmic reticulum, golgi	32.58	25.0
GSMUA_Achr9P27060_001	Banana	plastid	21.72	24.37

Protein Annotations

EnsemblPlants:GSMUA_Achr9P07990_001	EnsemblPlants:GSMUA_Achr9T07990_001	EnsemblPlantsGene:GSMUA_Achr9G07990_001	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR10891
PANTHER:PTHR10891:SF546	PFAM:PF13499	PFscan:PS50222	ScanProsite:PS00018	SEG:seg	SMART:SM00054
SUPFAM:SSF47473	UniParc:UPI0002956D6A	UniProt:M0TYF8	MapMan:35.1	:	:

Description

Calmodulin-like protein 5 [Source:GMGC_GENE;Acc:GSMUA_Achr9G07990_001]

Coordinates

chr9:+:5113642..5114307

Molecular Weight (calculated)

24611.5 Da

IEP (calculated)

4.550

GRAVY (calculated)

-0.205

Length

221 amino acids

Sequence
(BLAST)

001: MPAIFVGIFL ICHHLNSRLL RFLPEKLISL LLPFSWHPPT SKDGLSPPAT ALSSIASFRS PSFGPKASAR VMDPSELKRV FQMFDRNGDG RITKTELSDS
101: LENLGIYIPE AELASMIEKI DVNGDGCVDM DEFGALYRSI MDERDEEEDM REAFNVFDQN GDGYISVEEL RSVLVSLGVK QGRTAEDCRM MINKVDVDGD
201: GRVDFKEFKQ MMKGGGFAAL S

Best Arabidopsis Sequence Match ( AT2G43290.1 )
(BLAST)

001: MVRIFLLYNI LNSFLLSLVP KKLRTLFPLS WFDKTLHKNS PPSPSTMLPS PSSSSAPTKR IDPSELKRVF QMFDKNGDGR ITKEELNDSL ENLGIYIPDK
101: DLTQMIHKID ANGDGCVDID EFESLYSSIV DEHHNDGETE EEDMKDAFNV FDQDGDGFIT VEELKSVMAS LGLKQGKTLD GCKKMIMQVD ADGDGRVNYK
201: EFLQMMKGGG FSSSN

Arabidopsis Description

CML5MSS3 [Source:UniProtKB/TrEMBL;Acc:A0A178VP84]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.