Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 6
- vacuole 4
- plasma membrane 5
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P13420_001 | Banana | cytosol | 35.02 | 50.67 |
| GSMUA_Achr8P28890_001 | Banana | cytosol | 35.02 | 50.67 |
| GSMUA_Achr3P16870_001 | Banana | cytosol | 35.02 | 50.33 |
| GSMUA_Achr6P28770_001 | Banana | cytosol | 34.56 | 50.0 |
| GSMUA_Achr2P05840_001 | Banana | cytosol | 33.64 | 48.67 |
| TraesCS7D01G132700.1 | Wheat | endoplasmic reticulum | 48.85 | 45.89 |
| TraesCS7B01G034000.1 | Wheat | endoplasmic reticulum | 49.31 | 45.73 |
| Zm00001d037477_P001 | Maize | endoplasmic reticulum, vacuole | 50.69 | 45.27 |
| Os06t0172200-02 | Rice | plasma membrane | 48.85 | 44.92 |
| EER87935 | Sorghum | endoplasmic reticulum, vacuole | 48.85 | 43.27 |
| PGSC0003DMT400086334 | Potato | cytosol | 34.56 | 42.37 |
| HORVU7Hr1G027770.3 | Barley | endoplasmic reticulum | 43.32 | 41.05 |
| GSMUA_Achr8P17950_001 | Banana | cytosol, plastid | 30.41 | 37.29 |
| KRH03663 | Soybean | endoplasmic reticulum, extracellular | 38.71 | 36.68 |
| KRH20147 | Soybean | extracellular | 38.71 | 36.68 |
| GSMUA_Achr9P07990_001 | Banana | endoplasmic reticulum, golgi, plastid | 36.41 | 35.75 |
| Solyc07g007950.1.1 | Tomato | endoplasmic reticulum, extracellular, golgi | 36.41 | 35.59 |
| GSMUA_Achr11P... | Banana | cytosol, plastid | 28.11 | 35.47 |
| VIT_11s0016g05740.t01 | Wine grape | extracellular, golgi | 41.47 | 35.16 |
| PGSC0003DMT400079359 | Potato | extracellular, golgi | 37.33 | 34.62 |
| GSMUA_Achr8P01570_001 | Banana | cytosol | 27.65 | 32.43 |
| GSMUA_Achr8P09680_001 | Banana | plastid | 29.95 | 32.18 |
| TraesCS7A01G133200.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 48.85 | 31.36 |
| GSMUA_Achr6P09820_001 | Banana | cytosol | 29.49 | 24.52 |
| GSMUA_Achr9P27060_001 | Banana | plastid | 21.66 | 23.86 |
| GSMUA_Achr8P00110_001 | Banana | endoplasmic reticulum, golgi | 30.88 | 23.26 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:35.1 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSMUA_Achr6G35120_001 |
| EnsemblPlants:GSMUA_Achr6P35120_001 | EnsemblPlants:GSMUA_Achr6T35120_001 | InterPro:IPR002048 | UniProt:M0TCV5 | PFAM:PF13499 | ScanProsite:PS00018 |
| PFscan:PS50222 | PANTHER:PTHR10891 | PANTHER:PTHR10891:SF642 | SMART:SM00054 | SUPFAM:SSF47473 | TMHMM:TMhelix |
| UniParc:UPI0002957E4D | SEG:seg | : | : | : | : |
Description
Putative Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G35120_001]
Coordinates
chr6:-:33445172..33446040
Molecular Weight (calculated)
24067.8 Da
IEP (calculated)
4.357
GRAVY (calculated)
-0.276
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MEILLLFAIF IFTCGIINYY CFLPRSKLIP WLCSLLPAAS SPPKPVERCY KEEKGNEDDN IELQSIFSTF DKDGDGFITV KELEESLRRL GLAVTGNEAM
101: RMLERVDTNG DCLIDLGEFR ELYAALGRGQ GPSGGDGGGE EEEETALKEA FDVFDGNRDG VIAAEELATV LTSLGLKQGA RLEDCRDMIR RVDRDGDGKV
201: SFDEFKKMMK TKGGKLL
101: RMLERVDTNG DCLIDLGEFR ELYAALGRGQ GPSGGDGGGE EEEETALKEA FDVFDGNRDG VIAAEELATV LTSLGLKQGA RLEDCRDMIR RVDRDGDGKV
201: SFDEFKKMMK TKGGKLL
001: MDPTELKRVF QMFDKNGDGT ITGKELSETL RSLGIYIPDK ELTQMIEKID VNGDGCVDID EFGELYKTIM DEEDEEEEDM KEAFNVFDQN GDGFITVDEL
101: KAVLSSLGLK QGKTLDDCKK MIKKVDVDGD GRVNYKEFRQ MMKGGGFNSL
101: KAVLSSLGLK QGKTLDDCKK MIKKVDVDGD GRVNYKEFRQ MMKGGGFNSL
Arabidopsis Description
CML7Calmodulin-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNE7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.