Factsheet for GSMUA_Achr1P13420_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P05840_001	Banana	cytosol	92.67	92.67
GSMUA_Achr8P28890_001	Banana	cytosol	84.0	84.0
VIT_07s0289g00040.t01	Wine grape	cytosol	82.0	79.87
VIT_07s0141g00300.t01	Wine grape	cytosol	82.0	79.87
PGSC0003DMT400071189	Potato	cytosol	78.67	79.19
AT3G07490.1	Thale cress	cytosol	80.67	79.08
Solyc06g083000.1.1	Tomato	cytosol	78.0	78.52
Bra040379.1-P	Field mustard	cytosol	76.67	77.18
CDY60818	Canola	cytosol	76.67	77.18
GSMUA_Achr6P28770_001	Banana	cytosol	76.67	76.67
GSMUA_Achr3P16870_001	Banana	cytosol	76.67	76.16
KRH66763	Soybean	cytosol	76.0	75.0
KRG95097	Soybean	cytosol	75.33	74.34
Solyc09g055880.1.1	Tomato	cytosol	74.0	74.0
CDY07993	Canola	cytosol	75.33	73.86
Bra001254.1-P	Field mustard	cytosol	75.33	73.86
CDX74043	Canola	cytosol	74.67	73.2
Zm00001d023992_P001	Maize	cytosol	73.33	69.18
OQU78964	Sorghum	cytosol	74.67	67.88
Os12t0228800-01	Rice	cytosol	69.33	61.9
TraesCS7A01G050500.1	Wheat	cytosol	66.67	61.35
GSMUA_Achr9P07990_001	Banana	endoplasmic reticulum, golgi, plastid	85.33	57.92
TraesCS7D01G045800.1	Wheat	cytosol	66.67	57.8
TraesCS4A01G436700.1	Wheat	cytosol	66.0	56.9
Os04t0492800-01	Rice	cytosol, mitochondrion, nucleus, plastid	68.0	52.04
HORVU7Hr1G008910.2	Barley	cytosol	71.33	50.0
TraesCS2B01G367500.1	Wheat	plastid	65.33	45.79
TraesCS2A01G349100.1	Wheat	plastid	65.33	45.58
TraesCS2D01G347500.1	Wheat	plastid	65.33	44.55
Zm00001d003197_P001	Maize	plastid	61.33	41.44
EES11048	Sorghum	plastid	64.0	40.34
GSMUA_Achr8P17950_001	Banana	cytosol, plastid	42.0	35.59
GSMUA_Achr6P35120_001	Banana	endoplasmic reticulum	50.67	35.02
GSMUA_Achr8P01570_001	Banana	cytosol	42.67	34.59
GSMUA_Achr11P...	Banana	cytosol, plastid	38.67	33.72
GSMUA_Achr8P09680_001	Banana	plastid	38.67	28.71
GSMUA_Achr6P09820_001	Banana	cytosol	42.67	24.52
GSMUA_Achr9P27060_001	Banana	plastid	30.0	22.84
GSMUA_Achr8P00110_001	Banana	endoplasmic reticulum, golgi	42.0	21.88

Protein Annotations

EnsemblPlants:GSMUA_Achr1P13420_001	EnsemblPlants:GSMUA_Achr1T13420_001	EnsemblPlantsGene:GSMUA_Achr1G13420_001	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR10891
PANTHER:PTHR10891:SF546	PFAM:PF13499	PFscan:PS50222	ScanProsite:PS00018	SEG:seg	SMART:SM00054
SUPFAM:SSF47473	UniParc:UPI000294F0FE	UniProt:M0RZK0	MapMan:35.1	:	:

Description

Calmodulin-like protein 3 [Source:GMGC_GENE;Acc:GSMUA_Achr1G13420_001]

Coordinates

chr1:+:10258053..10258740

Molecular Weight (calculated)

16828.9 Da

IEP (calculated)

4.090

GRAVY (calculated)

-0.479

Length

150 amino acids

Sequence
(BLAST)

001: MDPSELKRVF QMFDRNGDGS ITKTELQDSL KNLGIHIPEE ELASMIEKID VNGDGCVDME EFGTLYQAIM DERDEDEDML EAFNVFDQNG DGFITVEELR
101: TVLGSLGLKQ GRTVEDCRRM ISKVDVDGDG KVNFKEFKQM MKGGGFAALT

Best Arabidopsis Sequence Match ( AT3G07490.1 )
(BLAST)

001: MDQAELARIF QMFDRNGDGK ITKQELNDSL ENLGIYIPDK DLVQMIEKID LNGDGYVDIE EFGGLYQTIM EERDEEEDMR EAFNVFDQNR DGFITVEELR
101: SVLASLGLKQ GRTLEDCKRM ISKVDVDGDG MVNFKEFKQM MKGGGFAALG SNL

Arabidopsis Description

CML3CML3 [Source:UniProtKB/TrEMBL;Acc:A0A178V7U1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.