Factsheet for GSMUA_Achr9P27060_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G068490.1	Barley	cytosol	24.37	55.81
TraesCS5D01G246000.1	Wheat	mitochondrion	46.7	50.27
TraesCS5A01G238900.1	Wheat	mitochondrion	46.7	50.27
TraesCS5B01G237500.1	Wheat	mitochondrion	45.69	49.18
VIT_03s0063g00530.t01	Wine grape	cytosol	43.15	46.7
Os09t0458700-01	Rice	cytosol, mitochondrion	43.65	46.49
Zm00001d020722_P001	Maize	cytosol, mitochondrion	42.64	45.65
EER96860	Sorghum	cytosol, mitochondrion	42.64	45.65
KRH50269	Soybean	mitochondrion	42.64	45.41
Solyc01g108190.2.1	Tomato	plastid	41.12	43.78
KRH71148	Soybean	cytosol	41.12	43.78
Solyc02g065000.1.1	Tomato	cytosol	38.07	43.35
PGSC0003DMT400089961	Potato	cytosol	37.56	42.77
PGSC0003DMT400066610	Potato	plastid	38.07	40.54
Bra039845.1-P	Field mustard	plastid	36.04	37.57
CDY37233	Canola	plastid	36.04	37.57
CDY66855	Canola	plastid	36.04	37.57
AT2G15680.1	Thale cress	plastid	35.03	36.9
KRH57807	Soybean	plastid	35.03	36.51
KRH76994	Soybean	cytosol, plastid	34.01	35.83
KRH04628	Soybean	plastid	33.5	34.74
KRH28478	Soybean	cytosol, plastid	32.49	34.22
GSMUA_Achr1P13420_001	Banana	cytosol	22.84	30.0
GSMUA_Achr8P28890_001	Banana	cytosol	22.34	29.33
GSMUA_Achr2P05840_001	Banana	cytosol	22.34	29.33
GSMUA_Achr8P17950_001	Banana	cytosol, plastid	25.89	28.81
GSMUA_Achr3P16870_001	Banana	cytosol	21.83	28.48
GSMUA_Achr6P28770_001	Banana	cytosol	20.81	27.33
GSMUA_Achr8P09680_001	Banana	plastid	27.41	26.73
GSMUA_Achr11P...	Banana	cytosol, plastid	22.34	25.58
GSMUA_Achr8P01570_001	Banana	cytosol	23.86	25.41
GSMUA_Achr9P07990_001	Banana	endoplasmic reticulum, golgi, plastid	24.37	21.72
GSMUA_Achr6P35120_001	Banana	endoplasmic reticulum	23.86	21.66
GSMUA_Achr6P09820_001	Banana	cytosol	26.4	19.92
GSMUA_Achr8P00110_001	Banana	endoplasmic reticulum, golgi	25.38	17.36

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	ncoils:Coil	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	EnsemblPlantsGene:GSMUA_Achr9G27060_001	EnsemblPlants:GSMUA_Achr9P27060_001	EnsemblPlants:GSMUA_Achr9T27060_001	InterPro:IPR002048
UniProt:M0U3W3	PFAM:PF13499	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR10891	PANTHER:PTHR10891:SF620
SMART:SM00054	SUPFAM:SSF47473	SignalP:SignalP-noTM	UniParc:UPI00029503ED	:	:

Description

Putative Calmodulin-like protein 1 [Source:GMGC_GENE;Acc:GSMUA_Achr9G27060_001]

Coordinates

chr9:-:31348232..31348825

Molecular Weight (calculated)

22310.2 Da

IEP (calculated)

6.287

GRAVY (calculated)

-0.499

Length

197 amino acids

Sequence
(BLAST)

001: MSCLMILCLN LRSTLSKKPN PRLEKMISTR ERQVSDLGLM RRYEPDEDEM KQVFDKMSNN KAKIEFEDMK ALLERLKVHD AAHEAKQILQ TVGSNKDGSV
101: DFGDFMAVHR KGGVWTSDIV SAFKMFDQDG DGQISAKEIK DMMGRLGEDC SLEECRRMVK EVDKNGDGLV GMDDFMAMMT RTMKLSRLPS SSTIALP

Best Arabidopsis Sequence Match ( AT2G15680.1 )
(BLAST)

001: MSNVSFLELQ YKLSKNKMLR KPSRMFSRDR QSSGLSSPGP GGFSQPSVNE MRRVFSRFDL DKDGKISQTE YKVVLRALGQ ERAIEDVPKI FKAVDLDGDG
101: FIDFREFIDA YKRSGGIRSS DIRNSFWTFD LNGDGKISAE EVMSVLWKLG ERCSLEDCNR MVRAVDADGD GLVNMEEFIK MMSSNNV

Arabidopsis Description

CML30CML30 [Source:UniProtKB/TrEMBL;Acc:A0A178VPG8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.