Factsheet for GSMUA_Achr6P28770_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P28890_001	Banana	cytosol	84.0	84.0
GSMUA_Achr3P16870_001	Banana	cytosol	78.0	77.48
GSMUA_Achr1P13420_001	Banana	cytosol	76.67	76.67
GSMUA_Achr2P05840_001	Banana	cytosol	76.0	76.0
VIT_07s0289g00040.t01	Wine grape	cytosol	74.0	72.08
VIT_07s0141g00300.t01	Wine grape	cytosol	74.0	72.08
PGSC0003DMT400071189	Potato	cytosol	71.33	71.81
Solyc06g083000.1.1	Tomato	cytosol	70.67	71.14
Solyc09g055880.1.1	Tomato	cytosol	70.0	70.0
Bra040379.1-P	Field mustard	cytosol	69.33	69.8
CDY60818	Canola	cytosol	69.33	69.8
AT3G07490.1	Thale cress	cytosol	70.67	69.28
Bra001254.1-P	Field mustard	cytosol	69.33	67.97
CDY07993	Canola	cytosol	69.33	67.97
CDX74043	Canola	cytosol	68.67	67.32
Zm00001d023992_P001	Maize	cytosol	70.67	66.67
KRG95097	Soybean	cytosol	67.33	66.45
KRH66763	Soybean	cytosol	66.67	65.79
OQU78964	Sorghum	cytosol	68.67	62.42
TraesCS7A01G050500.1	Wheat	cytosol	64.67	59.51
Os12t0228800-01	Rice	cytosol	64.67	57.74
TraesCS7D01G045800.1	Wheat	cytosol	64.67	56.07
TraesCS4A01G436700.1	Wheat	cytosol	64.0	55.17
GSMUA_Achr9P07990_001	Banana	endoplasmic reticulum, golgi, plastid	78.67	53.39
Os04t0492800-01	Rice	cytosol, mitochondrion, nucleus, plastid	68.67	52.55
HORVU7Hr1G008910.2	Barley	cytosol	68.0	47.66
TraesCS2B01G367500.1	Wheat	plastid	65.33	45.79
TraesCS2A01G349100.1	Wheat	plastid	64.67	45.12
TraesCS2D01G347500.1	Wheat	plastid	65.33	44.55
Zm00001d003197_P001	Maize	plastid	61.33	41.44
EES11048	Sorghum	plastid	62.0	39.08
GSMUA_Achr8P17950_001	Banana	cytosol, plastid	42.67	36.16
GSMUA_Achr11P...	Banana	cytosol, plastid	41.33	36.05
GSMUA_Achr6P35120_001	Banana	endoplasmic reticulum	50.0	34.56
GSMUA_Achr8P01570_001	Banana	cytosol	41.33	33.51
GSMUA_Achr8P09680_001	Banana	plastid	38.0	28.22
GSMUA_Achr6P09820_001	Banana	cytosol	41.33	23.75
GSMUA_Achr8P00110_001	Banana	endoplasmic reticulum, golgi	42.0	21.88
GSMUA_Achr9P27060_001	Banana	plastid	27.33	20.81

Protein Annotations

EnsemblPlants:GSMUA_Achr6P28770_001	EnsemblPlants:GSMUA_Achr6T28770_001	EnsemblPlantsGene:GSMUA_Achr6G28770_001	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR10891
PANTHER:PTHR10891:SF546	PFAM:PF13499	PFAM:PF13833	PFscan:PS50222	ScanProsite:PS00018	SEG:seg
SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI000294BE52	UniProt:M0TB22	MapMan:35.1	:

Description

Calmodulin-like protein 5 [Source:GMGC_GENE;Acc:GSMUA_Achr6G28770_001]

Coordinates

chr6:-:29069359..29069811

Molecular Weight (calculated)

16899.0 Da

IEP (calculated)

3.987

GRAVY (calculated)

-0.475

Length

150 amino acids

Sequence
(BLAST)

001: MDPSELMRVF QMFDRDGDGR ITKAEMSGSL QNLGIHVPEV EVAAMMERID ANGDGCVDME EFGTLCCSIM DERDEEEDMR EAFDVFDRNG DGFITVEELR
101: LVLASLGLKQ GRTAEDCRKM INEVDDDRDG MVDFKEFKQM MKGGGFEGLS

Best Arabidopsis Sequence Match ( AT1G05990.1 )
(BLAST)

001: MDPTELKRVF QMFDKNGDGT ITGKELSETL RSLGIYIPDK ELTQMIEKID VNGDGCVDID EFGELYKTIM DEEDEEEEDM KEAFNVFDQN GDGFITVDEL
101: KAVLSSLGLK QGKTLDDCKK MIKKVDVDGD GRVNYKEFRQ MMKGGGFNSL

Arabidopsis Description

CML7Calmodulin-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNE7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.