Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plasma membrane 1
- vacuole 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_07s0289g00040.t01 | Wine grape | cytosol | 100.0 | 100.0 |
| AT3G07490.1 | Thale cress | cytosol | 85.06 | 85.62 |
| Bra001254.1-P | Field mustard | cytosol | 83.12 | 83.66 |
| CDY07993 | Canola | cytosol | 83.12 | 83.66 |
| CDX74043 | Canola | cytosol | 82.47 | 83.01 |
| GSMUA_Achr2P05840_001 | Banana | cytosol | 80.52 | 82.67 |
| GSMUA_Achr1P13420_001 | Banana | cytosol | 79.87 | 82.0 |
| GSMUA_Achr8P28890_001 | Banana | cytosol | 79.22 | 81.33 |
| CDY60818 | Canola | cytosol | 77.92 | 80.54 |
| Bra040379.1-P | Field mustard | cytosol | 77.92 | 80.54 |
| KRH66763 | Soybean | cytosol | 79.22 | 80.26 |
| Solyc09g055880.1.1 | Tomato | cytosol | 77.92 | 80.0 |
| KRG95097 | Soybean | cytosol | 78.57 | 79.61 |
| PGSC0003DMT400071189 | Potato | cytosol | 75.32 | 77.85 |
| GSMUA_Achr3P16870_001 | Banana | cytosol | 74.68 | 76.16 |
| GSMUA_Achr6P28770_001 | Banana | cytosol | 72.08 | 74.0 |
| Zm00001d023992_P001 | Maize | cytosol | 70.78 | 68.55 |
| OQU78964 | Sorghum | cytosol | 70.13 | 65.45 |
| TraesCS7A01G050500.1 | Wheat | cytosol | 64.29 | 60.74 |
| Os12t0228800-01 | Rice | cytosol | 66.23 | 60.71 |
| TraesCS7D01G045800.1 | Wheat | cytosol | 64.29 | 57.23 |
| GSMUA_Achr9P07990_001 | Banana | endoplasmic reticulum, golgi, plastid | 81.82 | 57.01 |
| TraesCS4A01G436700.1 | Wheat | cytosol | 63.64 | 56.32 |
| VIT_05s0102g00450.t01 | Wine grape | endoplasmic reticulum, golgi | 75.97 | 54.67 |
| Os04t0492800-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 64.94 | 51.02 |
| HORVU7Hr1G008910.2 | Barley | cytosol | 68.83 | 49.53 |
| TraesCS2B01G367500.1 | Wheat | plastid | 62.99 | 45.33 |
| TraesCS2A01G349100.1 | Wheat | plastid | 62.34 | 44.65 |
| TraesCS2D01G347500.1 | Wheat | plastid | 62.99 | 44.09 |
| Zm00001d003197_P001 | Maize | plastid | 57.79 | 40.09 |
| EES11048 | Sorghum | plastid | 59.74 | 38.66 |
| VIT_14s0006g01400.t01 | Wine grape | cytosol | 35.71 | 36.67 |
| VIT_11s0016g05740.t01 | Wine grape | extracellular, golgi | 56.49 | 33.98 |
| VIT_08s0056g00290.t01 | Wine grape | cytosol, mitochondrion | 40.26 | 32.29 |
| VIT_03s0063g00530.t01 | Wine grape | cytosol | 33.12 | 28.02 |
| VIT_15s0048g00790.t01 | Wine grape | mitochondrion | 35.71 | 26.96 |
| VIT_08s0007g05790.t01 | Wine grape | mitochondrion, plastid | 35.06 | 24.32 |
Protein Annotations
| Gene3D:1.10.238.10 | EntrezGene:100267033 | wikigene:100267033 | EntrezGene:100854822 | wikigene:100854822 | MapMan:35.1 |
| UniProt:A5B6T8 | EMBL:AM448701 | ProteinID:CAN67589 | ProteinID:CAN67589.1 | ProteinID:CCB57289 | ProteinID:CCB57289.1 |
| ProteinID:CCB59041 | ProteinID:CCB59041.1 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | EMBL:FN596018 |
| EMBL:FN596270 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | InterPro:IPR002048 | EntrezGene:LOC100267033 |
| wikigene:LOC100267033 | EntrezGene:LOC100854822 | wikigene:LOC100854822 | PFAM:PF13499 | PRINTS:PR01697 | ScanProsite:PS00018 |
| PFscan:PS50222 | PANTHER:PTHR10891 | PANTHER:PTHR10891:SF662 | SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI00015202BE |
| ArrayExpress:VIT_07s0141g00300 | EnsemblPlantsGene:VIT_07s0141g00300 | EnsemblPlants:VIT_07s0141g00300.t01 | RefSeq:XP_002266441 | RefSeq:XP_002266441.2 | RefSeq:XP_003632448 |
| RefSeq:XP_003632448.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr7_random:-:183244..183719
Molecular Weight (calculated)
17516.8 Da
IEP (calculated)
4.282
GRAVY (calculated)
-0.597
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPAELCRVF QMFDRNGDGR ITKKELSDSL RNLGIYIPDK DLVQMIEKID VNRDGYVDME EFGALYQTIM DERDEEEDMR EAFNVFDQNG DGFITVEELR
101: SVLSSLGLKQ GRTIEDCKKM IQKVDVDGDG RVNYKEFKQM MKGGGFAALS SSGS
101: SVLSSLGLKQ GRTIEDCKKM IQKVDVDGDG RVNYKEFKQM MKGGGFAALS SSGS
001: MDQAELARIF QMFDRNGDGK ITKQELNDSL ENLGIYIPDK DLVQMIEKID LNGDGYVDIE EFGGLYQTIM EERDEEEDMR EAFNVFDQNR DGFITVEELR
101: SVLASLGLKQ GRTLEDCKRM ISKVDVDGDG MVNFKEFKQM MKGGGFAALG SNL
101: SVLASLGLKQ GRTLEDCKRM ISKVDVDGDG MVNFKEFKQM MKGGGFAALG SNL
Arabidopsis Description
CML3CML3 [Source:UniProtKB/TrEMBL;Acc:A0A178V7U1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.