Factsheet for Zm00001d023992_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU78964	Sorghum	cytosol	88.68	85.45
GSMUA_Achr2P05840_001	Banana	cytosol	71.7	76.0
Os12t0228800-01	Rice	cytosol	79.87	75.6
TraesCS7A01G050500.1	Wheat	cytosol	75.47	73.62
GSMUA_Achr1P13420_001	Banana	cytosol	69.18	73.33
GSMUA_Achr8P28890_001	Banana	cytosol	69.18	73.33
Solyc06g083000.1.1	Tomato	cytosol	66.67	71.14
VIT_07s0141g00300.t01	Wine grape	cytosol	68.55	70.78
VIT_07s0289g00040.t01	Wine grape	cytosol	68.55	70.78
GSMUA_Achr6P28770_001	Banana	cytosol	66.67	70.67
AT3G07490.1	Thale cress	cytosol	67.3	69.93
TraesCS7D01G045800.1	Wheat	cytosol	75.47	69.36
CDY60818	Canola	cytosol	64.78	69.13
Bra040379.1-P	Field mustard	cytosol	64.78	69.13
PGSC0003DMT400071189	Potato	cytosol	64.78	69.13
GSMUA_Achr3P16870_001	Banana	cytosol	64.78	68.21
CDY07993	Canola	cytosol	64.78	67.32
CDX74043	Canola	cytosol	64.78	67.32
Bra001254.1-P	Field mustard	cytosol	64.78	67.32
Solyc09g055880.1.1	Tomato	cytosol	62.89	66.67
TraesCS4A01G436700.1	Wheat	cytosol	72.96	66.67
KRG95097	Soybean	cytosol	62.26	65.13
KRH66763	Soybean	cytosol	61.01	63.82
HORVU7Hr1G008910.2	Barley	cytosol	77.36	57.48
GSMUA_Achr9P07990_001	Banana	endoplasmic reticulum, golgi, plastid	69.81	50.23
Zm00001d003197_P001	Maize	plastid	61.64	44.14
Zm00001d029028_P001	Maize	plastid	40.25	34.04
Zm00001d022430_P001	Maize	cytosol, plastid	42.77	34.0
Zm00001d007181_P001	Maize	plastid	43.4	33.99
Zm00001d047535_P001	Maize	plastid	39.62	33.69
Zm00001d042107_P001	Maize	mitochondrion	40.88	33.51
Zm00001d009985_P001	Maize	cytosol, mitochondrion, plastid	39.62	33.33
Zm00001d037477_P001	Maize	endoplasmic reticulum, vacuole	49.69	32.51
Zm00001d038061_P001	Maize	mitochondrion	41.51	32.35
Zm00001d020722_P001	Maize	cytosol, mitochondrion	33.33	28.8
Zm00001d008573_P001	Maize	plastid	37.11	28.78
Zm00001d039944_P001	Maize	cytosol, plastid	32.08	26.15
Zm00001d042108_P001	Maize	cytosol, plastid	30.82	25.52
Zm00001d004972_P001	Maize	plastid	28.3	24.06

Protein Annotations

EnsemblPlants:Zm00001d023992_P001	EnsemblPlants:Zm00001d023992_T001	EnsemblPlantsGene:Zm00001d023992	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR10891
PANTHER:PTHR10891:SF546	PFAM:PF13499	PFscan:PS50222	ProteinID:AQK40503.1	ScanProsite:PS00018	SMART:SM00054
SUPFAM:SSF47473	UniParc:UPI0002216B60	UniProt:K7TP50	MapMan:35.1	:	:

Description

EF hand family protein

Coordinates

chr10:-:34971922..34972401

Molecular Weight (calculated)

17643.6 Da

IEP (calculated)

4.198

GRAVY (calculated)

-0.655

Length

159 amino acids

Sequence
(BLAST)

001: MNSIESSELR KVFQMFDKNG DGQITKKELG ESLKNLGIHI SDDELDATMD KIDANGDGCV DVEEFGKLYR SIVGEGQVDK HDEEEDMREA FNVFDQNGDG
101: FITVEELRSV LSSLGLKQGR TAEDCRKMIS KVDADGDGRV DFTEFKQMMR GGGFDALGT

Best Arabidopsis Sequence Match ( AT2G43290.1 )
(BLAST)

001: MVRIFLLYNI LNSFLLSLVP KKLRTLFPLS WFDKTLHKNS PPSPSTMLPS PSSSSAPTKR IDPSELKRVF QMFDKNGDGR ITKEELNDSL ENLGIYIPDK
101: DLTQMIHKID ANGDGCVDID EFESLYSSIV DEHHNDGETE EEDMKDAFNV FDQDGDGFIT VEELKSVMAS LGLKQGKTLD GCKKMIMQVD ADGDGRVNYK
201: EFLQMMKGGG FSSSN

Arabidopsis Description

CML5MSS3 [Source:UniProtKB/TrEMBL;Acc:A0A178VP84]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.