CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
cytosol 3
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040379.1-P	Field mustard	cytosol	100.0	100.0
AT3G07490.1	Thale cress	cytosol	89.93	87.58
CDY07993	Canola	cytosol	87.25	84.97
CDX74043	Canola	cytosol	86.58	84.31
VIT_07s0141g00300.t01	Wine grape	cytosol	80.54	77.92
VIT_07s0289g00040.t01	Wine grape	cytosol	80.54	77.92
PGSC0003DMT400071189	Potato	cytosol	77.85	77.85
GSMUA_Achr2P05840_001	Banana	cytosol	77.85	77.33
GSMUA_Achr1P13420_001	Banana	cytosol	77.18	76.67
Solyc06g083000.1.1	Tomato	cytosol	76.51	76.51
GSMUA_Achr8P28890_001	Banana	cytosol	75.84	75.33
Solyc09g055880.1.1	Tomato	cytosol	74.5	74.0
GSMUA_Achr3P16870_001	Banana	cytosol	74.5	73.51
KRG95097	Soybean	cytosol	74.5	73.03
KRH66763	Soybean	cytosol	73.15	71.71
CDX86544	Canola	cytosol	70.47	69.54
CDY63788	Canola	cytosol	70.47	69.54
GSMUA_Achr6P28770_001	Banana	cytosol	69.8	69.33
CDY39714	Canola	cytosol	70.47	69.08
CDY33702	Canola	cytosol	70.47	69.08
CDX90890	Canola	cytosol	69.13	66.88
CDY22119	Canola	cytosol	66.44	65.13
CDY21953	Canola	cytosol	66.44	65.13
Zm00001d023992_P001	Maize	cytosol	69.13	64.78
OQU78964	Sorghum	cytosol	69.8	63.03
CDY17950	Canola	cytosol	66.44	59.64
TraesCS7A01G050500.1	Wheat	cytosol	65.1	59.51
Os12t0228800-01	Rice	cytosol	66.44	58.93
TraesCS7D01G045800.1	Wheat	cytosol	65.1	56.07
TraesCS4A01G436700.1	Wheat	cytosol	64.43	55.17
GSMUA_Achr9P07990_001	Banana	endoplasmic reticulum, golgi, plastid	76.51	51.58
Os04t0492800-01	Rice	cytosol, mitochondrion, nucleus, plastid	65.77	50.0
CDY06002	Canola	extracellular, vacuole	65.1	48.99
HORVU7Hr1G008910.2	Barley	cytosol	69.8	48.6
CDY72611	Canola	extracellular, vacuole	65.1	48.5
CDY30399	Canola	extracellular	67.11	47.62
CDX67796	Canola	vacuole	64.43	47.29
CDX98375	Canola	endoplasmic reticulum	64.43	47.06
CDY23356	Canola	vacuole	65.77	46.45
CDX83488	Canola	extracellular	65.1	45.33
TraesCS2B01G367500.1	Wheat	plastid	64.43	44.86
TraesCS2A01G349100.1	Wheat	plastid	63.76	44.19
TraesCS2D01G347500.1	Wheat	plastid	64.43	43.64
CDY55679	Canola	cytosol	41.61	40.52
CDX96150	Canola	cytosol	41.61	40.52
Zm00001d003197_P001	Maize	plastid	59.73	40.09
EES11048	Sorghum	plastid	62.42	39.08
CDX99691	Canola	cytosol	39.6	37.34
CDY27652	Canola	cytosol	39.6	37.11
CDX72996	Canola	cytosol	38.93	36.48
CDX96488	Canola	cytosol	38.93	36.48
CDY03874	Canola	cytosol	42.28	34.24
CDY40786	Canola	cytosol	42.28	34.24
CDY36129	Canola	cytosol	42.95	34.22
CDY44217	Canola	endoplasmic reticulum, golgi	64.43	34.04
CDX96729	Canola	cytosol	39.6	33.91
CDX94006	Canola	cytosol	42.28	33.87
CDX84967	Canola	cytosol	42.28	33.33
CDY27574	Canola	cytosol	42.28	32.98
CDY31433	Canola	cytosol, plastid	40.27	32.61
CDX76451	Canola	cytosol, plastid	40.27	32.61
CDY70127	Canola	cytosol	36.24	32.34
CDX83860	Canola	cytosol	38.26	32.2
CDX79002	Canola	cytosol	40.27	31.91
CDY14927	Canola	cytosol	38.93	31.87
CDX94789	Canola	cytosol	38.93	31.87
CDY49013	Canola	cytosol	38.26	31.32
CDY19196	Canola	cytosol	36.91	31.07
CDX82773	Canola	cytosol	38.26	29.84
CDX96968	Canola	cytosol	38.26	29.53
CDY37233	Canola	plastid	36.91	29.1
CDY66855	Canola	plastid	36.91	29.1
CDX98672	Canola	cytosol	41.61	24.41
CDY24421	Canola	endoplasmic reticulum, golgi	42.95	23.62
CDY60169	Canola	cytosol, plastid	32.89	23.56
CDY23852	Canola	cytosol, mitochondrion, plastid	33.56	23.47
CDY06925	Canola	cytosol, mitochondrion, plastid	33.56	23.04
CDX79938	Canola	cytosol, mitochondrion, plastid	32.89	23.0
CDY00910	Canola	cytosol, plastid	32.89	22.48
CDY14768	Canola	cytosol, mitochondrion, plastid	32.21	22.12

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	GO:A0A078J9Q4	UniProt:A0A078J9Q4	EnsemblPlants:CDY60818	ProteinID:CDY60818
ProteinID:CDY60818.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	EnsemblPlantsGene:GSBRNA2T00030100001	InterPro:IPR002048	PFAM:PF13499	PRINTS:PR01697	ScanProsite:PS00018
PFscan:PS50222	PANTHER:PTHR10891	PANTHER:PTHR10891:SF546	SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI0002544769
SEG:seg	:	:	:	:	:

Description

BnaAnng17220DBnaAnng17220D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J9Q4]

Coordinates

chrLK033918:-:7069..7740

Molecular Weight (calculated)

16997.3 Da

IEP (calculated)

4.122

GRAVY (calculated)

-0.501

Length

149 amino acids

Sequence
(BLAST)

001: MDQAELCRIF QMFDKNGDGK ITKQELNDSL KNLGIYIPEQ ELVQMIEKID LNGDGYVDSE EFGGLFETIM EERDEEEDMR EAFNVFDQNR DGFITVEELR
101: SVLASLGLKQ GRTLDECKRM IGKVDVDGDG MVDFKEFKKM MKAGGFAAL

Best Arabidopsis Sequence Match ( AT3G07490.1 )
(BLAST)

001: MDQAELARIF QMFDRNGDGK ITKQELNDSL ENLGIYIPDK DLVQMIEKID LNGDGYVDIE EFGGLYQTIM EERDEEEDMR EAFNVFDQNR DGFITVEELR
101: SVLASLGLKQ GRTLEDCKRM ISKVDVDGDG MVNFKEFKQM MKGGGFAALG SNL

Arabidopsis Description

CML3CML3 [Source:UniProtKB/TrEMBL;Acc:A0A178V7U1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.