CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039511.1-P	Field mustard	cytosol	92.75	98.35
CDY14927	Canola	cytosol	92.75	98.35
AT5G44460.1	Thale cress	cytosol	82.9	88.4
CDX94789	Canola	cytosol	82.38	87.36
CDY49013	Canola	cytosol	81.87	86.81
CDX94006	Canola	cytosol	67.88	70.43
CDX82773	Canola	cytosol	65.8	66.49
CDX79002	Canola	cytosol	64.25	65.96
CDY31433	Canola	cytosol, plastid	62.18	65.22
CDX76451	Canola	cytosol, plastid	61.66	64.67
PGSC0003DMT400071219	Potato	cytosol, plastid	59.07	57.29
Solyc10g074740.1.1	Tomato	cytosol, plastid	59.07	57.29
VIT_08s0056g00290.t01	Wine grape	cytosol, mitochondrion	55.96	56.25
KRH40630	Soybean	mitochondrion	52.85	55.74
GSMUA_Achr8P01570_001	Banana	cytosol	52.33	54.59
CDX98672	Canola	cytosol	68.39	51.97
Zm00001d047535_P001	Maize	plastid	49.74	51.34
Zm00001d029028_P001	Maize	plastid	49.74	51.06
Os03t0331700-02	Rice	plasma membrane	49.74	50.53
KXG39446	Sorghum	plastid	49.74	50.26
EER92319	Sorghum	cytosol	47.67	48.94
TraesCS4D01G174400.1	Wheat	plastid	47.67	48.68
Os08t0144100-01	Rice	plasma membrane	49.22	48.47
TraesCS4A01G132300.1	Wheat	plastid	47.67	48.17
TraesCS4B01G172400.1	Wheat	plastid	47.15	48.15
Os07t0681400-01	Rice	cytosol	48.19	47.21
HORVU4Hr1G050990.1	Barley	plastid	47.15	47.15
TraesCS2A01G103600.1	Wheat	plastid	46.63	47.12
TraesCS2B01G120900.1	Wheat	plastid	46.63	47.12
Zm00001d022430_P001	Maize	cytosol, plastid	48.7	47.0
TraesCS7D01G302700.1	Wheat	plastid	47.67	46.94
HORVU7Hr1G072770.1	Barley	plastid	47.67	46.46
TraesCS7B01G206200.1	Wheat	plastid	47.67	46.46
TraesCS7A01G306000.1	Wheat	plastid	47.15	46.43
EER97743	Sorghum	plastid	47.67	46.23
TraesCS2D01G103400.1	Wheat	plastid	45.6	46.07
Zm00001d007181_P001	Maize	plastid	48.19	45.81
TraesCS5B01G342800.1	Wheat	cytosol	36.79	43.83
TraesCS5D01G348900.1	Wheat	cytosol	36.79	43.56
TraesCS5A01G343000.1	Wheat	cytosol, mitochondrion	36.79	43.29
HORVU5Hr1G085800.2	Barley	cytosol	37.82	41.71
Os05t0312600-01	Rice	cytosol, plastid	39.9	39.09
CDX86544	Canola	cytosol	30.57	39.07
CDY63788	Canola	cytosol	30.57	39.07
CDX90890	Canola	cytosol	31.09	38.96
CDY60818	Canola	cytosol	29.53	38.26
CDX74043	Canola	cytosol	29.02	36.6
CDY07993	Canola	cytosol	29.02	36.6
CDY39714	Canola	cytosol	27.98	35.53
CDY22119	Canola	cytosol	27.98	35.53
CDY33702	Canola	cytosol	27.46	34.87
CDY21953	Canola	cytosol	27.46	34.87
CDX99691	Canola	cytosol	27.98	34.18
CDY27652	Canola	cytosol	27.98	33.96
CDY17950	Canola	cytosol	29.02	33.73
CDY55679	Canola	cytosol	26.42	33.33
CDX96150	Canola	cytosol	25.91	32.68
CDY30399	Canola	extracellular	33.68	30.95
CDY23356	Canola	vacuole	33.68	30.81
CDX67796	Canola	vacuole	32.12	30.54
CDX98375	Canola	endoplasmic reticulum	32.12	30.39
CDX83488	Canola	extracellular	33.68	30.37
CDY06002	Canola	extracellular, vacuole	31.09	30.3
CDY72611	Canola	extracellular, vacuole	31.09	30.0
CDY36129	Canola	cytosol	28.5	29.41
CDY03874	Canola	cytosol	27.98	29.35
CDY40786	Canola	cytosol	27.98	29.35
CDX84967	Canola	cytosol	28.5	29.1
CDX72996	Canola	cytosol	23.83	28.93
CDX96488	Canola	cytosol	23.83	28.93
CDY27574	Canola	cytosol	28.5	28.8
CDY70127	Canola	cytosol	24.87	28.74
CDX96729	Canola	cytosol	25.39	28.16
CDY66855	Canola	plastid	27.46	28.04
CDY37233	Canola	plastid	27.46	28.04
CDX83860	Canola	cytosol	25.39	27.68
CDY19196	Canola	cytosol	25.39	27.68
CDY60169	Canola	cytosol, plastid	25.39	23.56
CDY44217	Canola	endoplasmic reticulum, golgi	34.2	23.4
CDY23852	Canola	cytosol, mitochondrion, plastid	25.39	23.0
CDY00910	Canola	cytosol, plastid	25.91	22.94
CDX79938	Canola	cytosol, mitochondrion, plastid	24.87	22.54
CDY06925	Canola	cytosol, mitochondrion, plastid	24.35	21.66
CDY14768	Canola	cytosol, mitochondrion, plastid	23.83	21.2
CDY24421	Canola	endoplasmic reticulum, golgi	28.5	20.3

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	GO:A0A078EC47	EnsemblPlants:CDX96968	ProteinID:CDX96968	ProteinID:CDX96968.1
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
EnsemblPlantsGene:GSBRNA2T00103900001	InterPro:IPR002048	PFAM:PF13405	PFAM:PF13499	ScanProsite:PS00018	PFscan:PS50222
PANTHER:PTHR45003	PANTHER:PTHR45003:SF2	SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI0004EB4106	SEG:seg

Description

BnaC02g31060D

Coordinates

chrLK031896:+:1135105..1135686

Molecular Weight (calculated)

21867.8 Da

IEP (calculated)

4.588

GRAVY (calculated)

-0.533

Length

193 amino acids

Sequence
(BLAST)

001: MQHKKKKRAA TMEIISNEKK KLSRQSSSFR LRSPSLNTLR LHRIFDLFDK NNDGFITVEE LSQALSRLGL DADICELKPT IESFIKPDET GLRFDGFEAL
101: HKTLDESFFG GDCECDGSPD SDLEEAFNVF DEDGDGYISP EELQKVLKKL GLPEAGEIEH VEKMIVSVDS NHDGRVDFFE FKNMMQTVLV PSS

Best Arabidopsis Sequence Match ( AT5G44460.1 )
(BLAST)

001: MEINNEKKKL SRQSSSFRLR SPSLNALRLH RVFDLFDKNN DGFITVEELS QALSRLGLDA DFSDLKSTVD SFIKPDKTGL RFDDFAALHK TLDESFFGGE
101: GSCCDGSPES DLEEAFNVFD EDGDGFISAV ELQKVLKKLG LPEAGEIEQV EKMIVSVDSN HDGRVDFFEF KNMMQTVVVP S

Arabidopsis Description

CML43Probable calcium-binding protein CML43 [Source:UniProtKB/Swiss-Prot;Acc:Q9FI19]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.