CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 2
vacuole 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039511.1-P	Field mustard	cytosol	100.0	100.0
CDX96968	Canola	cytosol	98.35	92.75
AT5G44460.1	Thale cress	cytosol	87.36	87.85
CDX94789	Canola	cytosol	86.81	86.81
CDY49013	Canola	cytosol	86.26	86.26
CDX94006	Canola	cytosol	71.43	69.89
CDX82773	Canola	cytosol	69.23	65.97
CDX79002	Canola	cytosol	67.58	65.43
CDY31433	Canola	cytosol, plastid	65.38	64.67
CDX76451	Canola	cytosol, plastid	64.84	64.13
Solyc10g074740.1.1	Tomato	cytosol, plastid	63.19	57.79
PGSC0003DMT400071219	Potato	cytosol, plastid	63.19	57.79
VIT_08s0056g00290.t01	Wine grape	cytosol, mitochondrion	58.79	55.73
KRH40630	Soybean	mitochondrion	55.49	55.19
GSMUA_Achr8P01570_001	Banana	cytosol	56.04	55.14
CDX98672	Canola	cytosol	72.53	51.97
Zm00001d047535_P001	Maize	plastid	53.3	51.87
Zm00001d029028_P001	Maize	plastid	53.3	51.6
Os03t0331700-02	Rice	plasma membrane	53.3	51.05
KXG39446	Sorghum	plastid	53.3	50.79
EER92319	Sorghum	cytosol	51.1	49.47
TraesCS4D01G174400.1	Wheat	plastid	51.1	49.21
TraesCS4A01G132300.1	Wheat	plastid	51.1	48.69
TraesCS4B01G172400.1	Wheat	plastid	50.55	48.68
Os08t0144100-01	Rice	plasma membrane	52.2	48.47
HORVU4Hr1G050990.1	Barley	plastid	50.55	47.67
TraesCS2B01G120900.1	Wheat	plastid	50.0	47.64
TraesCS2A01G103600.1	Wheat	plastid	50.0	47.64
Zm00001d022430_P001	Maize	cytosol, plastid	52.2	47.5
Os07t0681400-01	Rice	cytosol	51.1	47.21
TraesCS7A01G306000.1	Wheat	plastid	50.55	46.94
TraesCS7D01G302700.1	Wheat	plastid	50.55	46.94
EER97743	Sorghum	plastid	51.1	46.73
TraesCS2D01G103400.1	Wheat	plastid	48.9	46.6
HORVU7Hr1G072770.1	Barley	plastid	50.55	46.46
TraesCS7B01G206200.1	Wheat	plastid	50.55	46.46
Zm00001d007181_P001	Maize	plastid	51.65	46.31
TraesCS5B01G342800.1	Wheat	cytosol	38.46	43.21
TraesCS5D01G348900.1	Wheat	cytosol	38.46	42.94
TraesCS5A01G343000.1	Wheat	cytosol, mitochondrion	38.46	42.68
HORVU5Hr1G085800.2	Barley	cytosol	39.56	41.14
CDX86544	Canola	cytosol	32.97	39.74
CDY63788	Canola	cytosol	32.97	39.74
CDX90890	Canola	cytosol	33.52	39.61
CDY60818	Canola	cytosol	31.87	38.93
Os05t0312600-01	Rice	cytosol, plastid	41.76	38.58
CDX74043	Canola	cytosol	31.32	37.25
CDY07993	Canola	cytosol	31.32	37.25
CDY39714	Canola	cytosol	30.22	36.18
CDY22119	Canola	cytosol	30.22	36.18
CDY21953	Canola	cytosol	29.67	35.53
CDY33702	Canola	cytosol	29.67	35.53
CDY17950	Canola	cytosol	31.32	34.34
CDX99691	Canola	cytosol	29.67	34.18
CDY27652	Canola	cytosol	29.67	33.96
CDY55679	Canola	cytosol	28.02	33.33
CDX96150	Canola	cytosol	27.47	32.68
CDY30399	Canola	extracellular	35.71	30.95
CDY23356	Canola	vacuole	35.71	30.81
CDX67796	Canola	vacuole	34.07	30.54
CDX98375	Canola	endoplasmic reticulum	34.07	30.39
CDX83488	Canola	extracellular	35.71	30.37
CDY06002	Canola	extracellular, vacuole	32.97	30.3
CDY72611	Canola	extracellular, vacuole	32.97	30.0
CDY36129	Canola	cytosol	30.22	29.41
CDY03874	Canola	cytosol	29.67	29.35
CDY40786	Canola	cytosol	29.67	29.35
CDX84967	Canola	cytosol	30.22	29.1
CDX96488	Canola	cytosol	25.27	28.93
CDX72996	Canola	cytosol	25.27	28.93
CDY27574	Canola	cytosol	30.22	28.8
CDY70127	Canola	cytosol	26.37	28.74
CDX96729	Canola	cytosol	26.92	28.16
CDY66855	Canola	plastid	29.12	28.04
CDY37233	Canola	plastid	29.12	28.04
CDX83860	Canola	cytosol	26.92	27.68
CDY19196	Canola	cytosol	26.92	27.68
CDY60169	Canola	cytosol, plastid	26.92	23.56
CDY44217	Canola	endoplasmic reticulum, golgi	36.26	23.4
CDY23852	Canola	cytosol, mitochondrion, plastid	26.92	23.0
CDY00910	Canola	cytosol, plastid	27.47	22.94
CDX79938	Canola	cytosol, mitochondrion, plastid	26.37	22.54
CDY06925	Canola	cytosol, mitochondrion, plastid	25.82	21.66
CDY14768	Canola	cytosol, mitochondrion, plastid	25.27	21.2
CDY24421	Canola	endoplasmic reticulum, golgi	30.22	20.3

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	GO:A0A078FPY7	UniProt:A0A078FPY7	EnsemblPlants:CDY14927	ProteinID:CDY14927
ProteinID:CDY14927.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	EnsemblPlantsGene:GSBRNA2T00084857001	InterPro:IPR002048	PFAM:PF13405	PFAM:PF13499	ScanProsite:PS00018
PFscan:PS50222	PANTHER:PTHR45003	PANTHER:PTHR45003:SF2	SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI000253E9A7
SEG:seg	:	:	:	:	:

Description

BnaA02g22690DBnaA02g22690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FPY7]

Coordinates

chrLK032048:+:614708..615256

Molecular Weight (calculated)

20571.1 Da

IEP (calculated)

4.202

GRAVY (calculated)

-0.395

Length

182 amino acids

Sequence
(BLAST)

001: MEIISNEKNK LSRQSSSFRL RSPSLNTLRL HRIFDLFDKN NDGFITVEEL SQALSRLGLD ADICELKPTI ESFIKPDETG LRFDGFEALH KTLDESFFGG
101: DCECDGSPDS DLEEAFNVFD EDGDGFISPE ELQKVLKKLG LPEAVEIEHV EKMIVSVDSN HDGRVDFFEF KNMMQTVLVP SS

Best Arabidopsis Sequence Match ( AT5G44460.1 )
(BLAST)

001: MEINNEKKKL SRQSSSFRLR SPSLNALRLH RVFDLFDKNN DGFITVEELS QALSRLGLDA DFSDLKSTVD SFIKPDKTGL RFDDFAALHK TLDESFFGGE
101: GSCCDGSPES DLEEAFNVFD EDGDGFISAV ELQKVLKKLG LPEAGEIEQV EKMIVSVDSN HDGRVDFFEF KNMMQTVVVP S

Arabidopsis Description

CML43Probable calcium-binding protein CML43 [Source:UniProtKB/Swiss-Prot;Acc:Q9FI19]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.