Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G43290.1 | Thale cress | extracellular | 88.78 | 88.37 |
| CDY23356 | Canola | vacuole | 86.45 | 87.68 |
| CDY30399 | Canola | extracellular | 85.51 | 87.14 |
| CDY63788 | Canola | cytosol | 51.87 | 73.51 |
| CDX86544 | Canola | cytosol | 51.87 | 73.51 |
| CDY72611 | Canola | extracellular, vacuole | 68.22 | 73.0 |
| CDX67796 | Canola | vacuole | 69.16 | 72.91 |
| CDY06002 | Canola | extracellular, vacuole | 67.29 | 72.73 |
| CDX98375 | Canola | endoplasmic reticulum | 68.69 | 72.06 |
| CDY44217 | Canola | endoplasmic reticulum, golgi | 94.39 | 71.63 |
| KRH29625 | Soybean | cytosol | 35.05 | 70.75 |
| CDX90890 | Canola | cytosol | 50.47 | 70.13 |
| CDY07993 | Canola | cytosol | 49.53 | 69.28 |
| CDX74043 | Canola | cytosol | 49.07 | 68.63 |
| CDY22119 | Canola | cytosol | 48.6 | 68.42 |
| CDY21953 | Canola | cytosol | 47.66 | 67.11 |
| CDY60818 | Canola | cytosol | 45.33 | 65.1 |
| Solyc05g050750.1.1 | Tomato | cytosol, unclear | 44.86 | 64.0 |
| PGSC0003DMT400018016 | Potato | cytosol | 44.86 | 64.0 |
| CDY17950 | Canola | cytosol | 47.66 | 61.45 |
| VIT_05s0102g00450.t01 | Wine grape | endoplasmic reticulum, golgi | 61.22 | 61.22 |
| CDY39714 | Canola | cytosol | 43.46 | 61.18 |
| CDY33702 | Canola | cytosol | 42.99 | 60.53 |
| Solyc11g044920.1.1 | Tomato | cytosol | 34.11 | 60.33 |
| KRH24625 | Soybean | cytosol | 59.35 | 57.47 |
| PGSC0003DMT400069195 | Potato | golgi, plastid | 56.54 | 55.25 |
| CDX96150 | Canola | cytosol | 30.37 | 42.48 |
| CDY55679 | Canola | cytosol | 29.91 | 41.83 |
| CDX99691 | Canola | cytosol | 30.37 | 41.14 |
| CDY27652 | Canola | cytosol | 30.37 | 40.88 |
| CDX94789 | Canola | cytosol | 30.84 | 36.26 |
| CDY49013 | Canola | cytosol | 30.84 | 36.26 |
| CDX94006 | Canola | cytosol | 31.31 | 36.02 |
| CDY14927 | Canola | cytosol | 30.37 | 35.71 |
| CDX79002 | Canola | cytosol | 29.91 | 34.04 |
| CDX72996 | Canola | cytosol | 25.23 | 33.96 |
| CDX96488 | Canola | cytosol | 25.23 | 33.96 |
| CDX96968 | Canola | cytosol | 30.37 | 33.68 |
| CDY70127 | Canola | cytosol | 26.17 | 33.53 |
| CDY37233 | Canola | plastid | 29.44 | 33.33 |
| CDY66855 | Canola | plastid | 29.44 | 33.33 |
| CDY36129 | Canola | cytosol | 28.97 | 33.16 |
| CDY31433 | Canola | cytosol, plastid | 28.5 | 33.15 |
| CDX76451 | Canola | cytosol, plastid | 28.5 | 33.15 |
| CDX82773 | Canola | cytosol | 29.44 | 32.98 |
| CDX96729 | Canola | cytosol | 26.64 | 32.76 |
| CDY40786 | Canola | cytosol | 28.04 | 32.61 |
| CDY03874 | Canola | cytosol | 28.04 | 32.61 |
| CDX84967 | Canola | cytosol | 28.5 | 32.28 |
| CDY19196 | Canola | cytosol | 26.64 | 32.2 |
| CDY27574 | Canola | cytosol | 28.5 | 31.94 |
| CDX83860 | Canola | cytosol | 26.17 | 31.64 |
| CDX98672 | Canola | cytosol | 31.31 | 26.38 |
| CDY06925 | Canola | cytosol, mitochondrion, plastid | 26.64 | 26.27 |
| CDY23852 | Canola | cytosol, mitochondrion, plastid | 25.7 | 25.82 |
| CDX79938 | Canola | cytosol, mitochondrion, plastid | 25.23 | 25.35 |
| CDY14768 | Canola | cytosol, mitochondrion, plastid | 25.7 | 25.35 |
| CDY60169 | Canola | cytosol, plastid | 23.83 | 24.52 |
| CDY00910 | Canola | cytosol, plastid | 23.36 | 22.94 |
| CDY24421 | Canola | endoplasmic reticulum, golgi | 28.97 | 22.88 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:35.1 | GO:A0A078D886 | EnsemblPlants:CDX83488 | ProteinID:CDX83488 | ProteinID:CDX83488.1 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| EnsemblPlantsGene:GSBRNA2T00139074001 | InterPro:IPR002048 | PFAM:PF13499 | ScanProsite:PS00018 | PFscan:PS50222 | PANTHER:PTHR10891 |
| PANTHER:PTHR10891:SF546 | SMART:SM00054 | SUPFAM:SSF47473 | SignalP:SignalP-noTM | UniParc:UPI0004EEB6A2 | SEG:seg |
Description
BnaA03g20180D
Coordinates
chrLK031832:+:1770034..1771010
Molecular Weight (calculated)
24308.0 Da
IEP (calculated)
4.988
GRAVY (calculated)
-0.542
Length
214 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRIFLLYNL LNSFLLSLVP KKLRTLFSLS WFDKTLHKNS PPSPSMLPSP SPSSTPTTKI DPSELKRVFQ TFDKNGDGRI TKQELKDSLE NLGIYIPDKD
101: LTQMIHNIDT NHDGCVDIDE FESLYRSIVN EHHNDGETKE EDMKEAFNVF DQDGDGFITV EELKSVMSSL GLKQGKTLEG CKKMIMQVDV DGDGRVNYKE
201: FLQMMKGDGF SRSS
101: LTQMIHNIDT NHDGCVDIDE FESLYRSIVN EHHNDGETKE EDMKEAFNVF DQDGDGFITV EELKSVMSSL GLKQGKTLEG CKKMIMQVDV DGDGRVNYKE
201: FLQMMKGDGF SRSS
001: MVRIFLLYNI LNSFLLSLVP KKLRTLFPLS WFDKTLHKNS PPSPSTMLPS PSSSSAPTKR IDPSELKRVF QMFDKNGDGR ITKEELNDSL ENLGIYIPDK
101: DLTQMIHKID ANGDGCVDID EFESLYSSIV DEHHNDGETE EEDMKDAFNV FDQDGDGFIT VEELKSVMAS LGLKQGKTLD GCKKMIMQVD ADGDGRVNYK
201: EFLQMMKGGG FSSSN
101: DLTQMIHKID ANGDGCVDID EFESLYSSIV DEHHNDGETE EEDMKDAFNV FDQDGDGFIT VEELKSVMAS LGLKQGKTLD GCKKMIMQVD ADGDGRVNYK
201: EFLQMMKGGG FSSSN
Arabidopsis Description
CML5MSS3 [Source:UniProtKB/TrEMBL;Acc:A0A178VP84]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.