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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX96729 Canola cytosol 90.4 91.95
CDY19196 Canola cytosol 89.27 89.27
CDY70127 Canola cytosol 82.49 87.43
AT1G18210.1 Thale cress cytosol 82.49 85.88
CDX72996 Canola cytosol 63.84 71.07
CDX96488 Canola cytosol 63.84 71.07
KRH41828 Soybean cytosol 55.37 54.44
Solyc06g068960.1.1 Tomato endoplasmic reticulum, unclear 45.2 51.95
PGSC0003DMT400074098 Potato cytosol 45.2 51.95
KRH24162 Soybean cytosol 40.68 51.43
PGSC0003DMT400014742 Potato cytosol 46.89 50.61
KRH48613 Soybean cytosol 50.85 50.28
Solyc03g118810.1.1 Tomato cytosol 45.76 49.39
KRH15405 Soybean cytosol 39.55 48.61
KRH02767 Soybean cytosol 41.24 48.03
CDY55679 Canola cytosol 38.42 44.44
TraesCS1A01G134000.1 Wheat cytosol 42.94 44.19
CDX96150 Canola cytosol 37.85 43.79
TraesCS1D01G125800.1 Wheat cytosol 42.37 43.6
TraesCS1B01G148000.1 Wheat cytosol 42.37 43.6
KRH16247 Soybean cytosol 31.64 42.75
KRH60530 Soybean plastid 51.41 42.13
EES19251 Sorghum cytosol 41.81 41.34
CDX99691 Canola cytosol 36.16 40.51
CDY27652 Canola cytosol 36.16 40.25
GSMUA_Achr8P17950_001 Banana cytosol, plastid 38.98 38.98
Os05t0223000-01 Rice plasma membrane 41.24 38.62
CDY60818 Canola cytosol 32.2 38.26
CDY39714 Canola cytosol 32.77 38.16
CDY33702 Canola cytosol 32.77 38.16
CDY40786 Canola cytosol 39.55 38.04
CDY03874 Canola cytosol 39.55 38.04
CDY36129 Canola cytosol 40.11 37.97
GSMUA_Achr11P... Banana cytosol, plastid 36.72 37.79
TraesCS3B01G045500.1 Wheat cytosol 39.55 37.43
CDX84967 Canola cytosol 39.55 37.04
Os01t0135700-01 Rice plasma membrane 37.85 37.02
CDY21953 Canola cytosol 31.64 36.84
TraesCS3D01G041500.1 Wheat cytosol 38.42 36.76
CDY27574 Canola cytosol 39.55 36.65
HORVU3Hr1G007420.1 Barley cytosol 38.42 36.56
TraesCS3A01G038300.1 Wheat cytosol 38.42 36.56
CDY22119 Canola cytosol 31.07 36.18
HORVU4Hr1G081250.1 Barley cytosol 12.43 36.07
CDY63788 Canola cytosol 30.51 35.76
CDX86544 Canola cytosol 30.51 35.76
CDY07993 Canola cytosol 30.51 35.29
CDX74043 Canola cytosol 30.51 35.29
CDX90890 Canola cytosol 28.81 33.12
EES00360 Sorghum cytosol 37.85 32.52
CDY66855 Canola plastid 34.46 32.28
HORVU1Hr1G029850.1 Barley cytosol 41.24 32.02
CDY37233 Canola plastid 33.9 31.75
Zm00001d039944_P001 Maize cytosol, plastid 34.46 31.28
Zm00001d008573_P001 Maize plastid 36.16 31.22
GSMUA_Achr6P09820_001 Banana cytosol 45.2 30.65
HORVU6Hr1G076690.1 Barley cytosol 25.42 30.0
HORVU7Hr1G101640.1 Barley cytosol, plastid 25.42 29.61
HORVU6Hr1G034200.1 Barley cytosol, plastid 26.55 29.56
HORVU1Hr1G074240.1 Barley cytosol, plastid 24.86 29.33
CDY17950 Canola cytosol 27.12 28.92
TraesCS3D01G041400.1 Wheat cytosol, plastid 38.42 28.57
HORVU5Hr1G018360.1 Barley cytosol, plastid 24.29 28.48
HORVU1Hr1G023720.1 Barley cytosol, plastid 25.42 28.12
CDX67796 Canola vacuole 32.2 28.08
HORVU7Hr1G029640.1 Barley cytosol, plastid 24.86 28.03
CDY49013 Canola cytosol 28.81 28.02
HORVU0Hr1G031990.1 Barley cytosol, plastid 24.86 27.85
CDY06002 Canola extracellular, vacuole 31.07 27.78
CDY72611 Canola extracellular, vacuole 31.07 27.5
CDX94789 Canola cytosol 28.25 27.47
HORVU4Hr1G032570.1 Barley cytosol, plastid 23.16 27.33
HORVU4Hr1G085560.1 Barley cytosol, plastid 27.12 27.12
CDX98375 Canola endoplasmic reticulum 31.07 26.96
CDY14927 Canola cytosol 27.68 26.92
CDY30399 Canola extracellular 31.64 26.67
CDY23356 Canola vacuole 31.64 26.54
CDX94006 Canola cytosol 27.68 26.34
CDY24421 Canola endoplasmic reticulum, golgi 40.11 26.2
CDX82773 Canola cytosol 28.25 26.18
CDX83488 Canola extracellular 31.64 26.17
CDY31433 Canola cytosol, plastid 27.12 26.09
CDX76451 Canola cytosol, plastid 27.12 26.09
CDY00910 Canola cytosol, plastid 31.64 25.69
CDX79002 Canola cytosol 27.12 25.53
HORVU5Hr1G077930.1 Barley cytosol 21.47 25.5
CDX96968 Canola cytosol 27.68 25.39
HORVU5Hr1G117570.1 Barley cytosol 18.64 25.38
CDY60169 Canola cytosol, plastid 28.81 24.52
CDX79938 Canola cytosol, mitochondrion, plastid 28.81 23.94
CDY23852 Canola cytosol, mitochondrion, plastid 28.81 23.94
CDY06925 Canola cytosol, mitochondrion, plastid 28.25 23.04
CDY14768 Canola cytosol, mitochondrion, plastid 28.25 23.04
CDX98672 Canola cytosol 28.81 20.08
CDY44217 Canola endoplasmic reticulum, golgi 31.07 19.5
HORVU5Hr1G073590.1 Barley cytosol, plastid 18.64 18.13
Protein Annotations
EnsemblPlants:CDX83860EnsemblPlantsGene:GSBRNA2T00139622001Gene3D:1.10.238.10GO:A0A078D3W6GO:GO:0003674GO:GO:0005488
GO:GO:0005509InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_domInterPro:IPR002048PANTHER:PTHR10891
PANTHER:PTHR10891:SF698PFAM:PF13499PFscan:PS50222ProteinID:CDX83860ProteinID:CDX83860.1ScanProsite:PS00018
SEG:segSMART:SM00054SUPFAM:SSF47473UniParc:UPI0004EF3AB6MapMan:35.1:
Description
BnaC08g17850D
Coordinates
chrLK031834:+:835313..836013
Molecular Weight (calculated)
18764.4 Da
IEP (calculated)
4.067
GRAVY (calculated)
-0.443
Length
177 amino acids
Sequence
(BLAST)
001: MASTNHETAK ATPASVDIAN PEELKKVFDQ FDSNGDGKIS VGELGGVFKA MGTSYTESEL NRALEDVDTD RDGFINVDEF SALCRSSSTA SEIRDAFDLY
101: DQDKNGLISA SELHQVLNRL GMSCSVEECT RMIGPVDADG DGNVNFEEFK KIMTSSSLTN SNNGSAAPAA AANGSST
Best Arabidopsis Sequence Match ( AT1G18210.2 )
(BLAST)
001: MASANPETAK PTPATVDMAN PEELKKVFDQ FDSNGDGKIS VLELGGVFKA MGTSYTETEL NRVLEEVDTD RDGYINLDEF STLCRSSSSA AEIRDAFDLY
101: DQDKNGLISA SELHQVLNRL GMSCSVEDCT RMIGPVDADG DGNVNFEEFQ KMMTSSSLLN SNGSAAPPST
Arabidopsis Description
CML27Probable calcium-binding protein CML27 [Source:UniProtKB/Swiss-Prot;Acc:Q9LE22]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.