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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • vacuole 1
  • mitochondrion 1
  • plastid 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plastid, vacuole
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:cytosol
Plant-mPloc:vacuole
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:peroxisome
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra010974.1-P Field mustard cytosol 100.0 100.0
CDX84967 Canola cytosol 92.51 91.53
CDY27574 Canola cytosol 92.51 90.58
AT1G24620.1 Thale cress cytosol 89.3 89.78
CDY03874 Canola cytosol 86.1 87.5
CDY40786 Canola cytosol 86.1 87.5
CDY24421 Canola endoplasmic reticulum, golgi 97.33 67.16
KRH75577 Soybean cytosol 48.13 59.21
KRH37459 Soybean cytosol 31.55 57.84
Solyc01g005370.2.1 Tomato cytosol 51.87 56.4
PGSC0003DMT400025178 Potato cytosol 51.87 55.75
KRH49632 Soybean cytosol, mitochondrion, plastid 52.94 54.4
Solyc04g008000.2.1 Tomato cytosol, plastid 55.08 53.93
KRH60410 Soybean cytosol, plastid 53.48 53.19
PGSC0003DMT400075801 Potato plastid 54.01 52.06
CDY60818 Canola cytosol 34.22 42.95
CDX90890 Canola cytosol 34.76 42.21
CDY63788 Canola cytosol 33.16 41.06
CDX86544 Canola cytosol 33.16 41.06
CDY07993 Canola cytosol 33.16 40.52
CDY55679 Canola cytosol 33.16 40.52
CDX74043 Canola cytosol 33.16 40.52
CDX99691 Canola cytosol 34.22 40.51
CDY27652 Canola cytosol 34.22 40.25
CDX96729 Canola cytosol 37.43 40.23
CDY21953 Canola cytosol 32.62 40.13
CDY22119 Canola cytosol 32.62 40.13
CDX83860 Canola cytosol 37.97 40.11
CDX96150 Canola cytosol 32.62 39.87
CDX72996 Canola cytosol 33.69 39.62
CDX96488 Canola cytosol 33.69 39.62
CDY39714 Canola cytosol 32.09 39.47
Os01t0949500-01 Rice plasma membrane 39.04 39.46
CDY19196 Canola cytosol 36.9 38.98
CDY70127 Canola cytosol 34.76 38.92
CDY33702 Canola cytosol 31.55 38.82
TraesCS3D01G484900.1 Wheat cytosol, mitochondrion 38.5 38.71
EES04217 Sorghum cytosol, mitochondrion, plastid 39.04 38.62
Zm00001d009985_P001 Maize cytosol, mitochondrion, plastid 38.5 38.1
TraesCS3B01G536200.1 Wheat cytosol, plastid 38.5 37.89
TraesCS3B01G538300.1 Wheat cytosol, plastid 38.5 37.89
TraesCS3A01G488400.1 Wheat cytosol, plastid 38.5 37.7
TraesCS3D01G483200.1 Wheat cytosol, plastid 38.5 37.7
CDY17950 Canola cytosol 33.16 37.35
HORVU3Hr1G107090.2 Barley cytosol, plastid 37.97 37.17
TraesCS1D01G239000.1 Wheat mitochondrion 37.43 37.04
TraesCS1B01G250900.1 Wheat mitochondrion 37.43 37.04
TraesCS1A01G238800.1 Wheat mitochondrion 37.43 37.04
Zm00001d042107_P001 Maize mitochondrion 37.97 36.6
HORVU1Hr1G057410.1 Barley mitochondrion 36.9 36.51
Os05t0380900-01 Rice cytosol, mitochondrion 37.43 34.83
Zm00001d038061_P001 Maize mitochondrion 37.43 34.31
EES19444 Sorghum plastid 36.36 34.17
CDY49013 Canola cytosol 30.48 31.32
CDX94789 Canola cytosol 30.48 31.32
CDY66855 Canola plastid 31.02 30.69
CDX94006 Canola cytosol 30.48 30.65
CDY30399 Canola extracellular 34.22 30.48
CDY14927 Canola cytosol 29.41 30.22
CDX76451 Canola cytosol, plastid 29.41 29.89
CDY31433 Canola cytosol, plastid 29.41 29.89
CDY23356 Canola vacuole 33.69 29.86
CDX79002 Canola cytosol 29.95 29.79
CDY37233 Canola plastid 29.95 29.63
CDX82773 Canola cytosol 29.95 29.32
CDX83488 Canola extracellular 33.16 28.97
CDY06002 Canola extracellular, vacuole 30.48 28.79
CDX67796 Canola vacuole 31.02 28.57
CDY72611 Canola extracellular, vacuole 30.48 28.5
CDX96968 Canola cytosol 29.41 28.5
CDX98375 Canola endoplasmic reticulum 31.02 28.43
CDY60169 Canola cytosol, plastid 28.34 25.48
CDY00910 Canola cytosol, plastid 29.41 25.23
CDY06925 Canola cytosol, mitochondrion, plastid 28.88 24.88
CDY23852 Canola cytosol, mitochondrion, plastid 27.81 24.41
CDY14768 Canola cytosol, mitochondrion, plastid 27.81 23.96
CDX79938 Canola cytosol, mitochondrion, plastid 27.27 23.94
CDX98672 Canola cytosol 30.48 22.44
CDY44217 Canola endoplasmic reticulum, golgi 33.16 21.99
Protein Annotations
Gene3D:1.10.238.10MapMan:35.1GO:A0A078HFE1UniProt:A0A078HFE1EnsemblPlants:CDY36129ProteinID:CDY36129
ProteinID:CDY36129.1InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_domGO:GO:0003674GO:GO:0005488
GO:GO:0005509EnsemblPlantsGene:GSBRNA2T00059970001InterPro:IPR002048PFAM:PF13499ScanProsite:PS00018PFscan:PS50222
PANTHER:PTHR10891PANTHER:PTHR10891:SF738SMART:SM00054SUPFAM:SSF47473UniParc:UPI0002545C59SEG:seg
Description
BnaA08g19190DBnaA08g19190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HFE1]
Coordinates
chrLK032367:+:293562..294125
Molecular Weight (calculated)
20346.8 Da
IEP (calculated)
4.481
GRAVY (calculated)
-0.611
Length
187 amino acids
Sequence
(BLAST)
001: MSNNKNQTNG SGGGSASRTG ADSPFLHKAR SGKTEIRELE AVFKKFDVNG DGKISSKELG AIMTSLGHEV PEEVLQKAIT DIDRKGDGYI NFEEFVELNT
101: KGMDQNEVLE NLKDAFSVYD IDGNGSISAE ELHEVLRSLG DECSIAECRK MIGGVDKDGD GTIDFEEFKI MMTLGSRRDN VMGGGQR
Best Arabidopsis Sequence Match ( AT1G24620.1 )
(BLAST)
001: MFNKNQGSNG GSSSNVGIGA DSPYLQKARS GKTEIRELEA VFKKFDVNGD GKISSKELGA IMTSLGHEVP EEELEKAITE IDRKGDGYIN FEEFVELNTK
101: GMDQNDVLEN LKDAFSVYDI DGNGSISAEE LHEVLRSLGD ECSIAECRKM IGGVDKDGDG TIDFEEFKIM MTMGSRRDNV MGGGPR
Arabidopsis Description
CML25Probable calcium-binding protein CML25 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYK2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.