Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003376.1-P | Field mustard | vacuole | 97.06 | 97.54 |
| CDX67796 | Canola | vacuole | 97.06 | 97.54 |
| CDY06002 | Canola | extracellular, vacuole | 87.75 | 90.4 |
| CDY72611 | Canola | extracellular, vacuole | 88.24 | 90.0 |
| AT3G59440.1 | Thale cress | endoplasmic reticulum, extracellular | 84.8 | 88.72 |
| CDY23356 | Canola | vacuole | 74.02 | 71.56 |
| CDY30399 | Canola | extracellular | 73.04 | 70.95 |
| CDY07993 | Canola | cytosol | 52.45 | 69.93 |
| CDX74043 | Canola | cytosol | 51.96 | 69.28 |
| KRH29625 | Soybean | cytosol | 35.78 | 68.87 |
| CDX83488 | Canola | extracellular | 72.06 | 68.69 |
| CDX86544 | Canola | cytosol | 50.49 | 68.21 |
| CDY63788 | Canola | cytosol | 50.49 | 68.21 |
| PGSC0003DMT400018016 | Potato | cytosol | 49.02 | 66.67 |
| Solyc05g050750.1.1 | Tomato | cytosol, unclear | 49.02 | 66.67 |
| CDY60818 | Canola | cytosol | 47.06 | 64.43 |
| CDY22119 | Canola | cytosol | 47.55 | 63.82 |
| CDX90890 | Canola | cytosol | 48.04 | 63.64 |
| CDY21953 | Canola | cytosol | 47.06 | 63.16 |
| CDY33702 | Canola | cytosol | 46.08 | 61.84 |
| CDY39714 | Canola | cytosol | 45.59 | 61.18 |
| VIT_05s0102g00450.t01 | Wine grape | endoplasmic reticulum, golgi | 60.78 | 57.94 |
| CDY17950 | Canola | cytosol | 46.08 | 56.63 |
| Solyc11g044920.1.1 | Tomato | cytosol | 33.33 | 56.2 |
| KRH24625 | Soybean | cytosol | 60.29 | 55.66 |
| PGSC0003DMT400069195 | Potato | golgi, plastid | 58.82 | 54.79 |
| CDY44217 | Canola | endoplasmic reticulum, golgi | 70.1 | 50.71 |
| CDX96150 | Canola | cytosol | 30.39 | 40.52 |
| CDY55679 | Canola | cytosol | 29.9 | 39.87 |
| CDX99691 | Canola | cytosol | 29.41 | 37.97 |
| CDY27652 | Canola | cytosol | 29.41 | 37.74 |
| CDX94006 | Canola | cytosol | 32.35 | 35.48 |
| CDX94789 | Canola | cytosol | 31.37 | 35.16 |
| CDY49013 | Canola | cytosol | 30.88 | 34.62 |
| CDY14927 | Canola | cytosol | 30.39 | 34.07 |
| CDY70127 | Canola | cytosol | 27.45 | 33.53 |
| CDX79002 | Canola | cytosol | 30.88 | 33.51 |
| CDX96729 | Canola | cytosol | 28.43 | 33.33 |
| CDX72996 | Canola | cytosol | 25.49 | 32.7 |
| CDX96488 | Canola | cytosol | 25.49 | 32.7 |
| CDY31433 | Canola | cytosol, plastid | 29.41 | 32.61 |
| CDX76451 | Canola | cytosol, plastid | 29.41 | 32.61 |
| CDX82773 | Canola | cytosol | 30.39 | 32.46 |
| CDX96968 | Canola | cytosol | 30.39 | 32.12 |
| CDY37233 | Canola | plastid | 29.41 | 31.75 |
| CDY66855 | Canola | plastid | 29.41 | 31.75 |
| CDY19196 | Canola | cytosol | 27.45 | 31.64 |
| CDX83860 | Canola | cytosol | 26.96 | 31.07 |
| CDY36129 | Canola | cytosol | 28.43 | 31.02 |
| CDY40786 | Canola | cytosol | 27.94 | 30.98 |
| CDY03874 | Canola | cytosol | 27.94 | 30.98 |
| CDX84967 | Canola | cytosol | 27.94 | 30.16 |
| CDY27574 | Canola | cytosol | 27.94 | 29.84 |
| CDY23852 | Canola | cytosol, mitochondrion, plastid | 26.47 | 25.35 |
| CDY06925 | Canola | cytosol, mitochondrion, plastid | 26.96 | 25.35 |
| CDX79938 | Canola | cytosol, mitochondrion, plastid | 25.98 | 24.88 |
| CDX98672 | Canola | cytosol | 30.88 | 24.8 |
| CDY14768 | Canola | cytosol, mitochondrion, plastid | 25.98 | 24.42 |
| CDY60169 | Canola | cytosol, plastid | 23.53 | 23.08 |
| CDY00910 | Canola | cytosol, plastid | 23.53 | 22.02 |
| CDY24421 | Canola | endoplasmic reticulum, golgi | 28.43 | 21.4 |
Protein Annotations
| EnsemblPlants:CDX98375 | EnsemblPlantsGene:GSBRNA2T00105945001 | Gene3D:1.10.238.10 | GO:A0A078E8E4 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR10891 |
| PANTHER:PTHR10891:SF662 | PFAM:PF13499 | PFscan:PS50222 | PRINTS:PR01697 | ProteinID:CDX98375 | ProteinID:CDX98375.1 |
| ScanProsite:PS00018 | SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI0004EF2D57 | MapMan:35.1 | : |
Description
BnaC06g17360D
Coordinates
chrLK031904:+:928199..928813
Molecular Weight (calculated)
23354.9 Da
IEP (calculated)
4.241
GRAVY (calculated)
-0.469
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRVFLLYNL INSFLLYLVP KKLRVLFPPS WYIDDNIPPP LSEPEPKSQT RTDPVDLKQV FQMFDKNGDG RITKEELNDS LENLGIFMPD KDLIQMIHKM
101: DANGDGCVDI HEFESLYGSI VEEKEEEDMR DAFNVFDQDG DGFISVEELK SVMASLGLKQ GKTLECCKEM IMQVDEDGDG RVNYKEFLQM MKTGGFNNRS
201: SSSN
101: DANGDGCVDI HEFESLYGSI VEEKEEEDMR DAFNVFDQDG DGFISVEELK SVMASLGLKQ GKTLECCKEM IMQVDEDGDG RVNYKEFLQM MKTGGFNNRS
201: SSSN
001: MVRVFLLYNL FNSFLLCLVP KKLRVFFPPS WYIDDKNPPP PDESETESPV DLKRVFQMFD KNGDGRITKE ELNDSLENLG IFMPDKDLIQ MIQKMDANGD
101: GCVDINEFES LYGSIVEEKE EGDMRDAFNV FDQDGDGFIT VEELNSVMTS LGLKQGKTLE CCKEMIMQVD EDGDGRVNYK EFLQMMKSGD FSNRS
101: GCVDINEFES LYGSIVEEKE EGDMRDAFNV FDQDGDGFIT VEELNSVMTS LGLKQGKTLE CCKEMIMQVD EDGDGRVNYK EFLQMMKSGD FSNRS
Arabidopsis Description
CML4Calmodulin-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX27]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.