Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 6
- golgi 6
- plastid 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g050750.1.1 | Tomato | cytosol, unclear | 54.67 | 78.0 |
| PGSC0003DMT400018016 | Potato | cytosol | 54.21 | 77.33 |
| VIT_07s0289g00040.t01 | Wine grape | cytosol | 54.67 | 75.97 |
| VIT_07s0141g00300.t01 | Wine grape | cytosol | 54.67 | 75.97 |
| KRH29625 | Soybean | cytosol | 36.45 | 73.58 |
| CDY63788 | Canola | cytosol | 51.87 | 73.51 |
| CDX86544 | Canola | cytosol | 51.87 | 73.51 |
| AT1G05990.1 | Thale cress | cytosol | 51.4 | 73.33 |
| KRH10131 | Soybean | endoplasmic reticulum | 70.09 | 71.09 |
| Solyc11g044920.1.1 | Tomato | cytosol | 38.78 | 68.59 |
| Bra000836.1-P | Field mustard | cytosol | 49.07 | 68.18 |
| CDX90890 | Canola | cytosol | 49.07 | 68.18 |
| Bra035972.1-P | Field mustard | cytosol | 35.05 | 67.57 |
| CDY21953 | Canola | cytosol | 47.66 | 67.11 |
| CDY22119 | Canola | cytosol | 47.66 | 67.11 |
| Bra034870.1-P | Field mustard | cytosol | 51.87 | 65.68 |
| Bra019554.1-P | Field mustard | cytosol | 51.87 | 65.68 |
| Bra037722.1-P | Field mustard | cytosol | 51.87 | 65.68 |
| KRH23209 | Soybean | cytosol, mitochondrion | 56.07 | 65.22 |
| AT4G03290.1 | Thale cress | cytosol | 46.73 | 64.94 |
| AT3G59440.1 | Thale cress | endoplasmic reticulum, extracellular | 58.88 | 64.62 |
| CDY23356 | Canola | vacuole | 63.55 | 64.45 |
| PGSC0003DMT400069195 | Potato | golgi, plastid | 64.95 | 63.47 |
| Bra007450.1-P | Field mustard | endoplasmic reticulum, vacuole | 58.41 | 63.13 |
| CDY30399 | Canola | extracellular | 61.68 | 62.86 |
| CDY06002 | Canola | extracellular, vacuole | 57.94 | 62.63 |
| CDY72611 | Canola | extracellular, vacuole | 58.41 | 62.5 |
| AT2G43290.1 | Thale cress | extracellular | 62.15 | 61.86 |
| CDX67796 | Canola | vacuole | 58.41 | 61.58 |
| CDX83488 | Canola | extracellular | 61.22 | 61.22 |
| Bra003376.1-P | Field mustard | vacuole | 57.94 | 61.08 |
| CDX98375 | Canola | endoplasmic reticulum | 57.94 | 60.78 |
| CDY17950 | Canola | cytosol | 46.73 | 60.24 |
| KRH24625 | Soybean | cytosol | 60.75 | 58.82 |
| CDY44217 | Canola | endoplasmic reticulum, golgi | 60.28 | 45.74 |
| VIT_14s0006g01400.t01 | Wine grape | cytosol | 26.17 | 37.33 |
| VIT_11s0016g05740.t01 | Wine grape | extracellular, golgi | 43.93 | 36.72 |
| VIT_08s0056g00290.t01 | Wine grape | cytosol, mitochondrion | 29.91 | 33.33 |
| VIT_03s0063g00530.t01 | Wine grape | cytosol | 27.57 | 32.42 |
| VIT_15s0048g00790.t01 | Wine grape | mitochondrion | 28.5 | 29.9 |
| VIT_08s0007g05790.t01 | Wine grape | mitochondrion, plastid | 26.64 | 25.68 |
Protein Annotations
| Gene3D:1.10.238.10 | EntrezGene:100254364 | wikigene:100254364 | MapMan:35.1 | UniProt:A5BNB3 | EMBL:AM465459 |
| ProteinID:CAN68118 | ProteinID:CAN68118.1 | ProteinID:CCB59840 | ProteinID:CCB59840.1 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS |
| InterPro:EF_hand_dom | EMBL:FN596500 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | InterPro:IPR002048 |
| EntrezGene:LOC100254364 | wikigene:LOC100254364 | PFAM:PF13499 | PRINTS:PR01697 | ScanProsite:PS00018 | PFscan:PS50222 |
| PANTHER:PTHR10891 | PANTHER:PTHR10891:SF546 | SMART:SM00054 | SUPFAM:SSF47473 | TIGR:TC64439 | UniParc:UPI00015213A8 |
| ArrayExpress:VIT_05s0102g00450 | EnsemblPlantsGene:VIT_05s0102g00450 | EnsemblPlants:VIT_05s0102g00450.t01 | unigene:Vvi.8452 | RefSeq:XP_002266359 | RefSeq:XP_002266359.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr5:-:22400856..22401918
Molecular Weight (calculated)
24523.5 Da
IEP (calculated)
4.921
GRAVY (calculated)
-0.449
Length
214 amino acids
Sequence
(BLAST)
(BLAST)
001: MPTFLHRIFL LYNLLNSLVL FLVPKKLRIF LPTSWFHPHQ TQEANLVDSK TSKTPGRSLV SRKRMESAEM KRVFQMFDRN GDGRITKTEL NDSLENLGIY
101: IPDKDLAQMI EKIDVNGDGC VDIDEFRALY ESIMEEKDED EDMKEAFNVF DQNGDGFITV DELKSVLGSL GLRHGRTVED CKRMIMKVDE DGDGKVDLKE
201: FKQMMRGGGF SALS
101: IPDKDLAQMI EKIDVNGDGC VDIDEFRALY ESIMEEKDED EDMKEAFNVF DQNGDGFITV DELKSVLGSL GLRHGRTVED CKRMIMKVDE DGDGKVDLKE
201: FKQMMRGGGF SALS
001: MVRIFLLYNI LNSFLLSLVP KKLRTLFPLS WFDKTLHKNS PPSPSTMLPS PSSSSAPTKR IDPSELKRVF QMFDKNGDGR ITKEELNDSL ENLGIYIPDK
101: DLTQMIHKID ANGDGCVDID EFESLYSSIV DEHHNDGETE EEDMKDAFNV FDQDGDGFIT VEELKSVMAS LGLKQGKTLD GCKKMIMQVD ADGDGRVNYK
201: EFLQMMKGGG FSSSN
101: DLTQMIHKID ANGDGCVDID EFESLYSSIV DEHHNDGETE EEDMKDAFNV FDQDGDGFIT VEELKSVMAS LGLKQGKTLD GCKKMIMQVD ADGDGRVNYK
201: EFLQMMKGGG FSSSN
Arabidopsis Description
CML5MSS3 [Source:UniProtKB/TrEMBL;Acc:A0A178VP84]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.