Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 5
- plastid 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83488 | Canola | extracellular | 71.63 | 94.39 |
| AT2G43290.1 | Thale cress | extracellular | 66.31 | 86.98 |
| CDY23356 | Canola | vacuole | 64.54 | 86.26 |
| CDY30399 | Canola | extracellular | 63.83 | 85.71 |
| CDX86544 | Canola | cytosol | 38.65 | 72.19 |
| CDY63788 | Canola | cytosol | 38.65 | 72.19 |
| CDX67796 | Canola | vacuole | 50.71 | 70.44 |
| CDY06002 | Canola | extracellular, vacuole | 49.29 | 70.2 |
| CDX98375 | Canola | endoplasmic reticulum | 50.71 | 70.1 |
| CDY72611 | Canola | extracellular, vacuole | 49.65 | 70.0 |
| KRH29625 | Soybean | cytosol | 25.89 | 68.87 |
| CDY07993 | Canola | cytosol | 37.23 | 68.63 |
| CDX90890 | Canola | cytosol | 37.23 | 68.18 |
| CDX74043 | Canola | cytosol | 36.88 | 67.97 |
| CDY22119 | Canola | cytosol | 36.52 | 67.76 |
| CDY21953 | Canola | cytosol | 35.82 | 66.45 |
| CDY60818 | Canola | cytosol | 34.04 | 64.43 |
| PGSC0003DMT400018016 | Potato | cytosol | 33.69 | 63.33 |
| Solyc05g050750.1.1 | Tomato | cytosol, unclear | 33.69 | 63.33 |
| Solyc11g044920.1.1 | Tomato | cytosol | 26.95 | 62.81 |
| CDY17950 | Canola | cytosol | 35.82 | 60.84 |
| VIT_05s0102g00450.t01 | Wine grape | endoplasmic reticulum, golgi | 45.74 | 60.28 |
| CDY39714 | Canola | cytosol | 32.27 | 59.87 |
| CDY33702 | Canola | cytosol | 31.91 | 59.21 |
| KRH24625 | Soybean | cytosol | 43.97 | 56.11 |
| PGSC0003DMT400069195 | Potato | golgi, plastid | 42.55 | 54.79 |
| CDX96150 | Canola | cytosol | 22.7 | 41.83 |
| CDY55679 | Canola | cytosol | 22.7 | 41.83 |
| CDX99691 | Canola | cytosol | 23.05 | 41.14 |
| CDY27652 | Canola | cytosol | 23.05 | 40.88 |
| CDX94789 | Canola | cytosol | 23.76 | 36.81 |
| CDX94006 | Canola | cytosol | 24.11 | 36.56 |
| CDY14927 | Canola | cytosol | 23.4 | 36.26 |
| CDY49013 | Canola | cytosol | 23.05 | 35.71 |
| CDX79002 | Canola | cytosol | 23.05 | 34.57 |
| CDX96968 | Canola | cytosol | 23.4 | 34.2 |
| CDX76451 | Canola | cytosol, plastid | 21.99 | 33.7 |
| CDY31433 | Canola | cytosol, plastid | 21.99 | 33.7 |
| CDX82773 | Canola | cytosol | 22.7 | 33.51 |
| CDY36129 | Canola | cytosol | 21.99 | 33.16 |
| CDY66855 | Canola | plastid | 21.99 | 32.8 |
| CDY37233 | Canola | plastid | 21.99 | 32.8 |
| CDX72996 | Canola | cytosol | 18.44 | 32.7 |
| CDX96488 | Canola | cytosol | 18.44 | 32.7 |
| CDY40786 | Canola | cytosol | 21.28 | 32.61 |
| CDY03874 | Canola | cytosol | 21.28 | 32.61 |
| CDY70127 | Canola | cytosol | 19.15 | 32.34 |
| CDX84967 | Canola | cytosol | 21.63 | 32.28 |
| CDX96729 | Canola | cytosol | 19.86 | 32.18 |
| CDY27574 | Canola | cytosol | 21.63 | 31.94 |
| CDY19196 | Canola | cytosol | 19.86 | 31.64 |
| CDX83860 | Canola | cytosol | 19.5 | 31.07 |
| CDX98672 | Canola | cytosol | 24.82 | 27.56 |
| CDY06925 | Canola | cytosol, mitochondrion, plastid | 20.57 | 26.73 |
| CDY23852 | Canola | cytosol, mitochondrion, plastid | 19.86 | 26.29 |
| CDX79938 | Canola | cytosol, mitochondrion, plastid | 19.5 | 25.82 |
| CDY14768 | Canola | cytosol, mitochondrion, plastid | 19.86 | 25.81 |
| CDY60169 | Canola | cytosol, plastid | 17.38 | 23.56 |
| CDY24421 | Canola | endoplasmic reticulum, golgi | 21.99 | 22.88 |
| CDY00910 | Canola | cytosol, plastid | 17.02 | 22.02 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:35.1 | GO:A0A078I2E3 | UniProt:A0A078I2E3 | EnsemblPlants:CDY44217 | ProteinID:CDY44217 |
| ProteinID:CDY44217.1 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | EnsemblPlantsGene:GSBRNA2T00079709001 | InterPro:IPR002048 | PFAM:PF13499 | ScanProsite:PS00018 | PFscan:PS50222 |
| PANTHER:PTHR10891 | PANTHER:PTHR10891:SF546 | SMART:SM00054 | SUPFAM:SSF47473 | SignalP:SignalP-noTM | UniParc:UPI0004EE4CF9 |
| SEG:seg | : | : | : | : | : |
Description
BnaC03g24090DBnaC03g24090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I2E3]
Coordinates
chrLK032583:-:5143..6970
Molecular Weight (calculated)
32124.4 Da
IEP (calculated)
5.097
GRAVY (calculated)
-0.437
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MMRIFLLYHL LNSFLLSLVP KKLRTLFSLS WFDKTLHKNS PPSPSMLPSP SPSSTPTTKI DPSELKRVFQ TFDKNGDGRI TKQELKDSLE NLGIYIPDKD
101: LTQMIHNIDT NHDGCVDIDE FESLYKSIVD EHHNDGETEE EDMKEAFNVF DQDGDGFITV EELKSVMGSL GLKQGKTQEG CKKMIMQVDV DGDGRVNYKE
201: FLQMMKGIAR PLTTFCVQRT NHLRQPTYPA KTFATFKIRR YRVELSISDG TESAVFVVFD AEMSWLTSVR AAEISELNAM SE
101: LTQMIHNIDT NHDGCVDIDE FESLYKSIVD EHHNDGETEE EDMKEAFNVF DQDGDGFITV EELKSVMGSL GLKQGKTQEG CKKMIMQVDV DGDGRVNYKE
201: FLQMMKGIAR PLTTFCVQRT NHLRQPTYPA KTFATFKIRR YRVELSISDG TESAVFVVFD AEMSWLTSVR AAEISELNAM SE
001: MVRIFLLYNI LNSFLLSLVP KKLRTLFPLS WFDKTLHKNS PPSPSTMLPS PSSSSAPTKR IDPSELKRVF QMFDKNGDGR ITKEELNDSL ENLGIYIPDK
101: DLTQMIHKID ANGDGCVDID EFESLYSSIV DEHHNDGETE EEDMKDAFNV FDQDGDGFIT VEELKSVMAS LGLKQGKTLD GCKKMIMQVD ADGDGRVNYK
201: EFLQMMKGGG FSSSN
101: DLTQMIHKID ANGDGCVDID EFESLYSSIV DEHHNDGETE EEDMKDAFNV FDQDGDGFIT VEELKSVMAS LGLKQGKTLD GCKKMIMQVD ADGDGRVNYK
201: EFLQMMKGGG FSSSN
Arabidopsis Description
CML5MSS3 [Source:UniProtKB/TrEMBL;Acc:A0A178VP84]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.