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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 3
  • plasma membrane 1
  • vacuole 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra013470.1-P Field mustard cytosol 100.0 100.0
CDX82773 Canola cytosol 93.09 91.62
CDX94006 Canola cytosol 85.64 86.56
AT4G20780.1 Thale cress cytosol 86.17 84.82
CDY31433 Canola cytosol, plastid 80.32 82.07
CDX76451 Canola cytosol, plastid 79.79 81.52
CDX94789 Canola cytosol 70.21 72.53
CDY49013 Canola cytosol 69.15 71.43
CDY14927 Canola cytosol 65.43 67.58
CDX96968 Canola cytosol 65.96 64.25
CDX98672 Canola cytosol 82.98 61.42
VIT_08s0056g00290.t01 Wine grape cytosol, mitochondrion 61.17 59.9
Solyc10g074740.1.1 Tomato cytosol, plastid 61.17 57.79
PGSC0003DMT400071219 Potato cytosol, plastid 60.64 57.29
KRH40630 Soybean mitochondrion 55.32 56.83
Zm00001d029028_P001 Maize plastid 54.26 54.26
GSMUA_Achr8P01570_001 Banana cytosol 53.19 54.05
EER92319 Sorghum cytosol 53.19 53.19
Zm00001d047535_P001 Maize plastid 52.66 52.94
KXG39446 Sorghum plastid 53.72 52.88
Os03t0331700-02 Rice plasma membrane 52.13 51.58
TraesCS7D01G302700.1 Wheat plastid 53.72 51.53
TraesCS4D01G174400.1 Wheat plastid 51.6 51.32
EER97743 Sorghum plastid 54.26 51.26
TraesCS7A01G306000.1 Wheat plastid 53.19 51.02
HORVU7Hr1G072770.1 Barley plastid 53.72 51.01
TraesCS7B01G206200.1 Wheat plastid 53.72 51.01
Os08t0144100-01 Rice plasma membrane 52.66 50.51
TraesCS4B01G172400.1 Wheat plastid 50.53 50.26
TraesCS4A01G132300.1 Wheat plastid 51.06 50.26
Zm00001d022430_P001 Maize cytosol, plastid 53.19 50.0
HORVU4Hr1G050990.1 Barley plastid 51.06 49.74
Zm00001d007181_P001 Maize plastid 53.19 49.26
Os07t0681400-01 Rice cytosol 51.06 48.73
TraesCS2B01G120900.1 Wheat plastid 49.47 48.69
TraesCS2A01G103600.1 Wheat plastid 49.47 48.69
TraesCS2D01G103400.1 Wheat plastid 48.94 48.17
TraesCS5D01G348900.1 Wheat cytosol 40.96 47.24
TraesCS5A01G343000.1 Wheat cytosol, mitochondrion 40.96 46.95
TraesCS5B01G342800.1 Wheat cytosol 40.43 46.91
HORVU5Hr1G085800.2 Barley cytosol 40.96 44.0
CDX86544 Canola cytosol 32.98 41.06
CDY63788 Canola cytosol 32.98 41.06
CDY60818 Canola cytosol 31.91 40.27
CDX90890 Canola cytosol 32.98 40.26
Os05t0312600-01 Rice cytosol, plastid 41.49 39.59
CDY22119 Canola cytosol 31.91 39.47
CDY21953 Canola cytosol 31.38 38.82
CDY07993 Canola cytosol 31.38 38.56
CDX74043 Canola cytosol 31.38 38.56
CDY39714 Canola cytosol 29.79 36.84
CDY33702 Canola cytosol 29.26 36.18
CDY17950 Canola cytosol 30.85 34.94
CDX99691 Canola cytosol 28.72 34.18
CDY27652 Canola cytosol 28.19 33.33
CDY55679 Canola cytosol 26.06 32.03
CDX96150 Canola cytosol 25.53 31.37
CDX67796 Canola vacuole 33.51 31.03
CDX98375 Canola endoplasmic reticulum 33.51 30.88
CDY72611 Canola extracellular, vacuole 32.45 30.5
CDY06002 Canola extracellular, vacuole 31.91 30.3
CDX84967 Canola cytosol 30.32 30.16
CDY30399 Canola extracellular 33.51 30.0
CDY36129 Canola cytosol 29.79 29.95
CDX83488 Canola extracellular 34.04 29.91
CDY23356 Canola vacuole 33.51 29.86
CDY27574 Canola cytosol 30.32 29.84
CDY03874 Canola cytosol 28.72 29.35
CDY40786 Canola cytosol 28.72 29.35
CDY66855 Canola plastid 28.72 28.57
CDY37233 Canola plastid 28.72 28.57
CDX96488 Canola cytosol 23.94 28.3
CDX72996 Canola cytosol 23.94 28.3
CDX96729 Canola cytosol 25.53 27.59
CDY70127 Canola cytosol 24.47 27.54
CDX83860 Canola cytosol 25.53 27.12
CDY19196 Canola cytosol 25.0 26.55
CDY44217 Canola endoplasmic reticulum, golgi 34.57 23.05
CDY60169 Canola cytosol, plastid 23.4 21.15
CDY06925 Canola cytosol, mitochondrion, plastid 23.94 20.74
CDY24421 Canola endoplasmic reticulum, golgi 29.79 20.66
CDY23852 Canola cytosol, mitochondrion, plastid 23.4 20.66
CDY00910 Canola cytosol, plastid 23.94 20.64
CDX79938 Canola cytosol, mitochondrion, plastid 22.87 20.19
CDY14768 Canola cytosol, mitochondrion, plastid 22.87 19.82
Protein Annotations
Gene3D:1.10.238.10MapMan:35.1GO:A0A078CQM3EnsemblPlants:CDX79002ProteinID:CDX79002ProteinID:CDX79002.1
InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_domGO:GO:0003674GO:GO:0005488GO:GO:0005509
EnsemblPlantsGene:GSBRNA2T00131525001InterPro:IPR002048PFAM:PF13405PFAM:PF13499ScanProsite:PS00018PFscan:PS50222
PANTHER:PTHR45003PANTHER:PTHR45003:SF2SMART:SM00054SUPFAM:SSF47473UniParc:UPI0002546BCBSEG:seg
Description
BnaA01g10690D
Coordinates
chrLK031816:-:1284358..1286639
Molecular Weight (calculated)
20698.9 Da
IEP (calculated)
4.246
GRAVY (calculated)
-0.458
Length
188 amino acids
Sequence
(BLAST)
001: MESNGDNKRV NIQSSPSFRL RSPSLNALRL QRIFDLFDKN GDGFITADEL SQALSHLGLN ADLSDLLSTV ESYIQPGNAG LNFHDFSSLH KTLDDSFFGG
101: AGDNDDDDPS STSADESDLA EAFKVFDENG DGFISARELQ TVLKKLGLPE GGEMERVEKM IVSVDRNKDG RVDFFEFKNM MHAVVIPS
Best Arabidopsis Sequence Match ( AT4G20780.1 )
(BLAST)
001: MESNNNEKKK VARQSSSFRL RSPSLNALRL QRIFDLFDKN GDGFITVEEL SQALTRLGLN ADLSDLKSTV ESYIQPGNTG LNFDDFSSLH KTLDDSFFGG
101: ACGGGENEDD PSSAAENESD LAEAFKVFDE NGDGFISARE LQTVLKKLGL PEGGEMERVE KMIVSVDRNQ DGRVDFFEFK NMMRTVVIPS S
Arabidopsis Description
CML42Calcium-binding protein CML42 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVG9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.