Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 3
- plasma membrane 1
- vacuole 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra013470.1-P | Field mustard | cytosol | 100.0 | 100.0 |
CDX82773 | Canola | cytosol | 93.09 | 91.62 |
CDX94006 | Canola | cytosol | 85.64 | 86.56 |
AT4G20780.1 | Thale cress | cytosol | 86.17 | 84.82 |
CDY31433 | Canola | cytosol, plastid | 80.32 | 82.07 |
CDX76451 | Canola | cytosol, plastid | 79.79 | 81.52 |
CDX94789 | Canola | cytosol | 70.21 | 72.53 |
CDY49013 | Canola | cytosol | 69.15 | 71.43 |
CDY14927 | Canola | cytosol | 65.43 | 67.58 |
CDX96968 | Canola | cytosol | 65.96 | 64.25 |
CDX98672 | Canola | cytosol | 82.98 | 61.42 |
VIT_08s0056g00290.t01 | Wine grape | cytosol, mitochondrion | 61.17 | 59.9 |
Solyc10g074740.1.1 | Tomato | cytosol, plastid | 61.17 | 57.79 |
PGSC0003DMT400071219 | Potato | cytosol, plastid | 60.64 | 57.29 |
KRH40630 | Soybean | mitochondrion | 55.32 | 56.83 |
Zm00001d029028_P001 | Maize | plastid | 54.26 | 54.26 |
GSMUA_Achr8P01570_001 | Banana | cytosol | 53.19 | 54.05 |
EER92319 | Sorghum | cytosol | 53.19 | 53.19 |
Zm00001d047535_P001 | Maize | plastid | 52.66 | 52.94 |
KXG39446 | Sorghum | plastid | 53.72 | 52.88 |
Os03t0331700-02 | Rice | plasma membrane | 52.13 | 51.58 |
TraesCS7D01G302700.1 | Wheat | plastid | 53.72 | 51.53 |
TraesCS4D01G174400.1 | Wheat | plastid | 51.6 | 51.32 |
EER97743 | Sorghum | plastid | 54.26 | 51.26 |
TraesCS7A01G306000.1 | Wheat | plastid | 53.19 | 51.02 |
HORVU7Hr1G072770.1 | Barley | plastid | 53.72 | 51.01 |
TraesCS7B01G206200.1 | Wheat | plastid | 53.72 | 51.01 |
Os08t0144100-01 | Rice | plasma membrane | 52.66 | 50.51 |
TraesCS4B01G172400.1 | Wheat | plastid | 50.53 | 50.26 |
TraesCS4A01G132300.1 | Wheat | plastid | 51.06 | 50.26 |
Zm00001d022430_P001 | Maize | cytosol, plastid | 53.19 | 50.0 |
HORVU4Hr1G050990.1 | Barley | plastid | 51.06 | 49.74 |
Zm00001d007181_P001 | Maize | plastid | 53.19 | 49.26 |
Os07t0681400-01 | Rice | cytosol | 51.06 | 48.73 |
TraesCS2B01G120900.1 | Wheat | plastid | 49.47 | 48.69 |
TraesCS2A01G103600.1 | Wheat | plastid | 49.47 | 48.69 |
TraesCS2D01G103400.1 | Wheat | plastid | 48.94 | 48.17 |
TraesCS5D01G348900.1 | Wheat | cytosol | 40.96 | 47.24 |
TraesCS5A01G343000.1 | Wheat | cytosol, mitochondrion | 40.96 | 46.95 |
TraesCS5B01G342800.1 | Wheat | cytosol | 40.43 | 46.91 |
HORVU5Hr1G085800.2 | Barley | cytosol | 40.96 | 44.0 |
CDX86544 | Canola | cytosol | 32.98 | 41.06 |
CDY63788 | Canola | cytosol | 32.98 | 41.06 |
CDY60818 | Canola | cytosol | 31.91 | 40.27 |
CDX90890 | Canola | cytosol | 32.98 | 40.26 |
Os05t0312600-01 | Rice | cytosol, plastid | 41.49 | 39.59 |
CDY22119 | Canola | cytosol | 31.91 | 39.47 |
CDY21953 | Canola | cytosol | 31.38 | 38.82 |
CDY07993 | Canola | cytosol | 31.38 | 38.56 |
CDX74043 | Canola | cytosol | 31.38 | 38.56 |
CDY39714 | Canola | cytosol | 29.79 | 36.84 |
CDY33702 | Canola | cytosol | 29.26 | 36.18 |
CDY17950 | Canola | cytosol | 30.85 | 34.94 |
CDX99691 | Canola | cytosol | 28.72 | 34.18 |
CDY27652 | Canola | cytosol | 28.19 | 33.33 |
CDY55679 | Canola | cytosol | 26.06 | 32.03 |
CDX96150 | Canola | cytosol | 25.53 | 31.37 |
CDX67796 | Canola | vacuole | 33.51 | 31.03 |
CDX98375 | Canola | endoplasmic reticulum | 33.51 | 30.88 |
CDY72611 | Canola | extracellular, vacuole | 32.45 | 30.5 |
CDY06002 | Canola | extracellular, vacuole | 31.91 | 30.3 |
CDX84967 | Canola | cytosol | 30.32 | 30.16 |
CDY30399 | Canola | extracellular | 33.51 | 30.0 |
CDY36129 | Canola | cytosol | 29.79 | 29.95 |
CDX83488 | Canola | extracellular | 34.04 | 29.91 |
CDY23356 | Canola | vacuole | 33.51 | 29.86 |
CDY27574 | Canola | cytosol | 30.32 | 29.84 |
CDY03874 | Canola | cytosol | 28.72 | 29.35 |
CDY40786 | Canola | cytosol | 28.72 | 29.35 |
CDY66855 | Canola | plastid | 28.72 | 28.57 |
CDY37233 | Canola | plastid | 28.72 | 28.57 |
CDX96488 | Canola | cytosol | 23.94 | 28.3 |
CDX72996 | Canola | cytosol | 23.94 | 28.3 |
CDX96729 | Canola | cytosol | 25.53 | 27.59 |
CDY70127 | Canola | cytosol | 24.47 | 27.54 |
CDX83860 | Canola | cytosol | 25.53 | 27.12 |
CDY19196 | Canola | cytosol | 25.0 | 26.55 |
CDY44217 | Canola | endoplasmic reticulum, golgi | 34.57 | 23.05 |
CDY60169 | Canola | cytosol, plastid | 23.4 | 21.15 |
CDY06925 | Canola | cytosol, mitochondrion, plastid | 23.94 | 20.74 |
CDY24421 | Canola | endoplasmic reticulum, golgi | 29.79 | 20.66 |
CDY23852 | Canola | cytosol, mitochondrion, plastid | 23.4 | 20.66 |
CDY00910 | Canola | cytosol, plastid | 23.94 | 20.64 |
CDX79938 | Canola | cytosol, mitochondrion, plastid | 22.87 | 20.19 |
CDY14768 | Canola | cytosol, mitochondrion, plastid | 22.87 | 19.82 |
Protein Annotations
Gene3D:1.10.238.10 | MapMan:35.1 | GO:A0A078CQM3 | EnsemblPlants:CDX79002 | ProteinID:CDX79002 | ProteinID:CDX79002.1 |
InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
EnsemblPlantsGene:GSBRNA2T00131525001 | InterPro:IPR002048 | PFAM:PF13405 | PFAM:PF13499 | ScanProsite:PS00018 | PFscan:PS50222 |
PANTHER:PTHR45003 | PANTHER:PTHR45003:SF2 | SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI0002546BCB | SEG:seg |
Description
BnaA01g10690D
Coordinates
chrLK031816:-:1284358..1286639
Molecular Weight (calculated)
20698.9 Da
IEP (calculated)
4.246
GRAVY (calculated)
-0.458
Length
188 amino acids
Sequence
(BLAST)
(BLAST)
001: MESNGDNKRV NIQSSPSFRL RSPSLNALRL QRIFDLFDKN GDGFITADEL SQALSHLGLN ADLSDLLSTV ESYIQPGNAG LNFHDFSSLH KTLDDSFFGG
101: AGDNDDDDPS STSADESDLA EAFKVFDENG DGFISARELQ TVLKKLGLPE GGEMERVEKM IVSVDRNKDG RVDFFEFKNM MHAVVIPS
101: AGDNDDDDPS STSADESDLA EAFKVFDENG DGFISARELQ TVLKKLGLPE GGEMERVEKM IVSVDRNKDG RVDFFEFKNM MHAVVIPS
001: MESNNNEKKK VARQSSSFRL RSPSLNALRL QRIFDLFDKN GDGFITVEEL SQALTRLGLN ADLSDLKSTV ESYIQPGNTG LNFDDFSSLH KTLDDSFFGG
101: ACGGGENEDD PSSAAENESD LAEAFKVFDE NGDGFISARE LQTVLKKLGL PEGGEMERVE KMIVSVDRNQ DGRVDFFEFK NMMRTVVIPS S
101: ACGGGENEDD PSSAAENESD LAEAFKVFDE NGDGFISARE LQTVLKKLGL PEGGEMERVE KMIVSVDRNQ DGRVDFFEFK NMMRTVVIPS S
Arabidopsis Description
CML42Calcium-binding protein CML42 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVG9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.