Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- endoplasmic reticulum 1
- cytosol 2
- vacuole 1
- mitochondrion 2
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU6Hr1G011970.2 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G20780.1 | HORVU6Hr1G011970.2 | AT2G46600.1 | 19720824 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G342800.1 | Wheat | cytosol | 86.86 | 93.83 |
| TraesCS5A01G343000.1 | Wheat | cytosol, mitochondrion | 85.71 | 91.46 |
| TraesCS5D01G348900.1 | Wheat | cytosol | 84.57 | 90.8 |
| Os05t0312600-01 | Rice | cytosol, plastid | 66.29 | 58.88 |
| GSMUA_Achr8P01570_001 | Banana | cytosol | 48.0 | 45.41 |
| HORVU4Hr1G050990.1 | Barley | plastid | 47.43 | 43.01 |
| CDX94006 | Canola | cytosol | 45.14 | 42.47 |
| AT5G44460.1 | Thale cress | cytosol | 42.86 | 41.44 |
| HORVU7Hr1G072770.1 | Barley | plastid | 46.86 | 41.41 |
| CDX79002 | Canola | cytosol | 44.0 | 40.96 |
| Bra013470.1-P | Field mustard | cytosol | 44.0 | 40.96 |
| CDX76451 | Canola | cytosol, plastid | 42.86 | 40.76 |
| CDY31433 | Canola | cytosol, plastid | 42.86 | 40.76 |
| Bra020916.1-P | Field mustard | cytosol, plastid | 42.86 | 40.76 |
| CDX94789 | Canola | cytosol | 42.29 | 40.66 |
| Bra033745.1-P | Field mustard | cytosol | 42.29 | 40.66 |
| CDX82773 | Canola | cytosol | 44.0 | 40.31 |
| AT4G20780.1 | Thale cress | cytosol | 44.0 | 40.31 |
| CDY49013 | Canola | cytosol | 41.71 | 40.11 |
| KRH40630 | Soybean | mitochondrion | 41.71 | 39.89 |
| Bra039511.1-P | Field mustard | cytosol | 41.14 | 39.56 |
| CDY14927 | Canola | cytosol | 41.14 | 39.56 |
| VIT_08s0056g00290.t01 | Wine grape | cytosol, mitochondrion | 42.29 | 38.54 |
| CDX96968 | Canola | cytosol | 41.71 | 37.82 |
| Solyc10g074740.1.1 | Tomato | cytosol, plastid | 42.29 | 37.19 |
| PGSC0003DMT400071219 | Potato | cytosol, plastid | 41.71 | 36.68 |
| CDX98672 | Canola | cytosol | 45.71 | 31.5 |
| HORVU5Hr1G068490.1 | Barley | cytosol | 15.43 | 31.4 |
| HORVU4Hr1G081250.1 | Barley | cytosol | 10.86 | 31.15 |
| Bra038801.1-P | Field mustard | cytosol | 45.71 | 30.65 |
| HORVU3Hr1G107090.2 | Barley | cytosol, plastid | 32.57 | 29.84 |
| HORVU3Hr1G007420.1 | Barley | cytosol | 30.86 | 29.03 |
| HORVU1Hr1G074240.1 | Barley | cytosol, plastid | 23.43 | 27.33 |
| HORVU4Hr1G032570.1 | Barley | cytosol, plastid | 23.43 | 27.33 |
| HORVU7Hr1G008910.2 | Barley | cytosol | 33.14 | 27.1 |
| HORVU1Hr1G057410.1 | Barley | mitochondrion | 29.14 | 26.98 |
| HORVU6Hr1G034200.1 | Barley | cytosol, plastid | 24.0 | 26.42 |
| HORVU5Hr1G043460.1 | Barley | plastid | 27.43 | 26.23 |
| HORVU7Hr1G029640.1 | Barley | cytosol, plastid | 22.29 | 24.84 |
| HORVU7Hr1G101640.1 | Barley | cytosol, plastid | 21.14 | 24.34 |
| HORVU6Hr1G076690.1 | Barley | cytosol | 20.57 | 24.0 |
| HORVU1Hr1G023720.1 | Barley | cytosol, plastid | 21.71 | 23.75 |
| HORVU5Hr1G018360.1 | Barley | cytosol, plastid | 20.0 | 23.18 |
| HORVU7Hr1G027770.3 | Barley | endoplasmic reticulum | 30.29 | 23.14 |
| HORVU4Hr1G085560.1 | Barley | cytosol, plastid | 22.86 | 22.6 |
| HORVU0Hr1G031990.1 | Barley | cytosol, plastid | 20.0 | 22.15 |
| HORVU5Hr1G077930.1 | Barley | cytosol | 18.86 | 22.15 |
| HORVU5Hr1G117570.1 | Barley | cytosol | 16.0 | 21.54 |
| HORVU1Hr1G029850.1 | Barley | cytosol | 26.86 | 20.61 |
| HORVU3Hr1G106950.3 | Barley | cytosol | 22.86 | 14.81 |
| HORVU5Hr1G073590.1 | Barley | cytosol, plastid | 13.14 | 12.64 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G085800.2 | EnsemblPlantsGene:HORVU5Hr1G085800 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR45003 | PANTHER:PTHR45003:SF1 |
| PFAM:PF13405 | PFAM:PF13499 | PFscan:PS50222 | ScanProsite:PS00018 | SEG:seg | SMART:SM00054 |
| SUPFAM:SSF47473 | UniParc:UPI0002959F96 | UniProt:M0WZV6 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr5H:-:575552447..575559345
Molecular Weight (calculated)
18728.2 Da
IEP (calculated)
4.489
GRAVY (calculated)
-0.144
Length
175 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTAPPQPNQ QQQRHRRLRV RRVFDLFDND GDGVITAGEL SGALGRLGLA LGAQADVLIA EYVAPGMPGL RFADFEALHA ELAGGGEEDE EAEMREAFAV
101: FDENGDGYIS AAELQAVLAR MGVPEAACMA RVRDMIAAHD QDSDGRVDFH EFKAMMAAGL VSAVKVVNRG RSVVG
101: FDENGDGYIS AAELQAVLAR MGVPEAACMA RVRDMIAAHD QDSDGRVDFH EFKAMMAAGL VSAVKVVNRG RSVVG
001: MEINNEKKKL SRQSSSFRLR SPSLNALRLH RVFDLFDKNN DGFITVEELS QALSRLGLDA DFSDLKSTVD SFIKPDKTGL RFDDFAALHK TLDESFFGGE
101: GSCCDGSPES DLEEAFNVFD EDGDGFISAV ELQKVLKKLG LPEAGEIEQV EKMIVSVDSN HDGRVDFFEF KNMMQTVVVP S
101: GSCCDGSPES DLEEAFNVFD EDGDGFISAV ELQKVLKKLG LPEAGEIEQV EKMIVSVDSN HDGRVDFFEF KNMMQTVVVP S
Arabidopsis Description
CML43Probable calcium-binding protein CML43 [Source:UniProtKB/Swiss-Prot;Acc:Q9FI19]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.