Factsheet for HORVU6Hr1G011970.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G050990.1
HORVU5Hr1G085800.2
HORVU7Hr1G072770.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G46600.1	HORVU4Hr1G050990.1	AT4G20780.1	19720824
AT2G46600.1	HORVU5Hr1G085800.2	AT4G20780.1	19720824
AT2G46600.1	HORVU7Hr1G072770.1	AT4G20780.1	19720824

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G118100.1	Wheat	cytosol	84.56	91.27
TraesCS6A01G065900.1	Wheat	cytosol	83.09	90.4
TraesCS6B01G088900.1	Wheat	cytosol	82.35	89.6
Os02t0122600-00	Rice	cytosol	73.53	68.03
GSMUA_Achr1P03980_001	Banana	cytosol	56.62	62.1
Bra004524.1-P	Field mustard	cytosol	44.85	55.96
CDX80031	Canola	cytosol	44.85	55.96
VIT_15s0046g00070.t01	Wine grape	cytosol	51.47	55.12
KRH47865	Soybean	cytosol	48.53	52.8
KRH06431	Soybean	cytosol	48.53	52.8
Bra000430.1-P	Field mustard	cytosol	45.59	52.54
KRH68937	Soybean	cytosol	48.53	52.38
KRG97213	Soybean	cytosol	47.79	51.59
Zm00001d053926_P001	Maize	cytosol	62.5	50.9
Solyc10g009340.1.1	Tomato	cytosol	45.59	50.41
PGSC0003DMT400048609	Potato	cytosol	44.85	50.0
CDY27313	Canola	cytosol	48.53	49.62
CDY61726	Canola	cytosol	47.79	48.87
CDY13397	Canola	cytosol	47.79	48.87
Bra039271.1-P	Field mustard	cytosol	47.79	48.87
AT2G46600.1	Thale cress	cytosol	47.79	48.15
CDX83356	Canola	cytosol	46.32	47.01
CDX95707	Canola	cytosol	45.59	46.27
CDY41540	Canola	cytosol	44.85	41.78
HORVU3Hr1G077070.1	Barley	cytosol	35.29	36.36
HORVU7Hr1G101740.2	Barley	cytosol, plastid	34.56	29.19

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	UniProt:A0A287TBT3	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0008150	GO:GO:0009653	GO:GO:0009987
GO:GO:0010091	GO:GO:0016043	GO:GO:0030154	EnsemblPlantsGene:HORVU6Hr1G011970	EnsemblPlants:HORVU6Hr1G011970.2	InterPro:IPR002048
PFAM:PF13833	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR44180	PANTHER:PTHR44180:SF7	SUPFAM:SSF47473
UniParc:UPI000B462ACA	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:22274873..22275514

Molecular Weight (calculated)

14042.7 Da

IEP (calculated)

4.039

GRAVY (calculated)

0.042

Length

136 amino acids

Sequence
(BLAST)

001: RPIAWSWESM AADDGAGAYE DLLPVMAGRL GTAGLLSELR AGFRLLADPA RGAITAESLR RSAGAVLGVP GMTAEEARAM VGEGDHDGDG ALSEHEFCVL
101: MVRLSPGIMA DAEGWLEEAI ADELLPPPPP PPAPAA

Best Arabidopsis Sequence Match ( AT2G46600.1 )
(BLAST)

001: MEPTEKSMLL ETTSTTKMET KYEDMLPVMA EKMDVEEFVS ELCKGFSLLA DPERHLITAE SLRRNSGILG IEGMSKEDAQ GMVREGDLDG DGALNQTEFC
101: VLMVRLSPEM MEDAETWLEK ALTQELCNHN LSSMP

Arabidopsis Description

KICCalcium-binding protein KIC [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPX9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.