Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000430.1-P | Field mustard | cytosol | 87.31 | 99.15 |
| CDX95707 | Canola | cytosol | 95.52 | 95.52 |
| CDX80031 | Canola | cytosol | 70.9 | 87.16 |
| CDY61726 | Canola | cytosol | 85.82 | 86.47 |
| CDY13397 | Canola | cytosol | 85.07 | 85.71 |
| CDY27313 | Canola | cytosol | 85.07 | 85.71 |
| AT2G46600.1 | Thale cress | cytosol | 82.09 | 81.48 |
| KRH47865 | Soybean | cytosol | 61.19 | 65.6 |
| KRH06431 | Soybean | cytosol | 60.45 | 64.8 |
| CDY41540 | Canola | cytosol | 69.4 | 63.7 |
| KRH68937 | Soybean | cytosol | 58.21 | 61.9 |
| PGSC0003DMT400048609 | Potato | cytosol | 55.97 | 61.48 |
| VIT_15s0046g00070.t01 | Wine grape | cytosol | 58.21 | 61.42 |
| Solyc10g009340.1.1 | Tomato | cytosol | 55.97 | 60.98 |
| KRG97213 | Soybean | cytosol | 56.72 | 60.32 |
| GSMUA_Achr1P03980_001 | Banana | cytosol | 55.22 | 59.68 |
| TraesCS6A01G065900.1 | Wheat | cytosol | 48.51 | 52.0 |
| TraesCS6B01G088900.1 | Wheat | cytosol | 48.51 | 52.0 |
| TraesCSU01G118100.1 | Wheat | cytosol | 46.27 | 49.21 |
| CDY48640 | Canola | cytosol | 46.27 | 47.33 |
| CDY29293 | Canola | cytosol | 44.78 | 47.24 |
| HORVU6Hr1G011970.2 | Barley | cytosol | 47.01 | 46.32 |
| CDY61745 | Canola | cytosol | 44.78 | 45.8 |
| CDY42456 | Canola | cytosol | 44.78 | 45.8 |
| CDY28767 | Canola | cytosol | 44.78 | 45.8 |
| Os02t0122600-00 | Rice | cytosol | 47.76 | 43.54 |
| Zm00001d053926_P001 | Maize | cytosol | 47.01 | 37.72 |
| CDX89262 | Canola | cytosol, peroxisome, plastid | 45.52 | 22.43 |
Protein Annotations
| EnsemblPlants:CDX83356 | EnsemblPlantsGene:GSBRNA2T00138919001 | Gene3D:1.10.238.10 | GO:A0A078D1V2 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR44180 |
| PANTHER:PTHR44180:SF7 | PFAM:PF13833 | PFscan:PS50222 | ProteinID:CDX83356 | ProteinID:CDX83356.1 | ScanProsite:PS00018 |
| SUPFAM:SSF47473 | UniParc:UPI0004EF329D | MapMan:35.1 | : | : | : |
Description
BnaA03g21500D
Coordinates
chrLK031832:-:1175491..1175895
Molecular Weight (calculated)
15012.9 Da
IEP (calculated)
4.196
GRAVY (calculated)
-0.489
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPQSKKSCI RETSTKMETK YEDMLPIMAE KMDVEEFVSE LCKGFSLLAD PERHVITAES LRRNSGVLGI EGMSKDDAEG MIREGDLDGD GALNQTEFCV
101: LMVRLSPEMM EDAETWLEKA ISQEIGNHDH ASLP
101: LMVRLSPEMM EDAETWLEKA ISQEIGNHDH ASLP
001: MEPTEKSMLL ETTSTTKMET KYEDMLPVMA EKMDVEEFVS ELCKGFSLLA DPERHLITAE SLRRNSGILG IEGMSKEDAQ GMVREGDLDG DGALNQTEFC
101: VLMVRLSPEM MEDAETWLEK ALTQELCNHN LSSMP
101: VLMVRLSPEM MEDAETWLEK ALTQELCNHN LSSMP
Arabidopsis Description
KICCalcium-binding protein KIC [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPX9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.