Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plasma membrane 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| KRH40630 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G46600.1 | KRH40630 | AT4G20780.1 | 19720824 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG97213 | Soybean | cytosol | 96.03 | 96.03 |
| KRH47865 | Soybean | cytosol | 78.57 | 79.2 |
| KRH06431 | Soybean | cytosol | 76.19 | 76.8 |
| Bra004524.1-P | Field mustard | cytosol | 61.9 | 71.56 |
| CDX80031 | Canola | cytosol | 61.9 | 71.56 |
| VIT_15s0046g00070.t01 | Wine grape | cytosol | 69.05 | 68.5 |
| PGSC0003DMT400048609 | Potato | cytosol | 65.87 | 68.03 |
| Solyc10g009340.1.1 | Tomato | cytosol | 65.87 | 67.48 |
| Bra000430.1-P | Field mustard | cytosol | 59.52 | 63.56 |
| GSMUA_Achr1P03980_001 | Banana | cytosol | 61.11 | 62.1 |
| AT2G46600.1 | Thale cress | cytosol | 65.87 | 61.48 |
| Bra039271.1-P | Field mustard | cytosol | 64.29 | 60.9 |
| CDY61726 | Canola | cytosol | 64.29 | 60.9 |
| CDY27313 | Canola | cytosol | 64.29 | 60.9 |
| CDY13397 | Canola | cytosol | 64.29 | 60.9 |
| CDX83356 | Canola | cytosol | 61.9 | 58.21 |
| CDX95707 | Canola | cytosol | 58.73 | 55.22 |
| TraesCS6B01G088900.1 | Wheat | cytosol | 51.59 | 52.0 |
| TraesCS6A01G065900.1 | Wheat | cytosol | 51.59 | 52.0 |
| TraesCSU01G118100.1 | Wheat | cytosol | 51.59 | 51.59 |
| KRH22491 | Soybean | cytosol | 48.41 | 50.0 |
| KRH26856 | Soybean | cytosol | 48.41 | 50.0 |
| HORVU6Hr1G011970.2 | Barley | cytosol | 52.38 | 48.53 |
| KRH55440 | Soybean | cytosol | 38.89 | 48.51 |
| KRH27149 | Soybean | cytosol | 43.65 | 47.83 |
| KRH25447 | Soybean | cytosol | 47.62 | 47.62 |
| KRH22182 | Soybean | cytosol | 43.65 | 47.41 |
| KRH21601 | Soybean | cytosol | 42.86 | 47.37 |
| KRH10720 | Soybean | cytosol | 42.86 | 47.37 |
| CDY41540 | Canola | cytosol | 54.76 | 47.26 |
| Os02t0122600-00 | Rice | cytosol | 53.97 | 46.26 |
| KRH25972 | Soybean | cytosol | 43.65 | 46.22 |
| KRH55477 | Soybean | cytosol | 42.06 | 44.54 |
| KRH26016 | Soybean | cytosol | 38.89 | 44.14 |
| KRH22173 | Soybean | cytosol | 38.89 | 39.52 |
| KRH27151 | Soybean | cytosol | 37.3 | 38.52 |
| Zm00001d053926_P001 | Maize | cytosol | 50.79 | 38.32 |
Protein Annotations
| Gene3D:1.10.238.10 | EntrezGene:100787197 | MapMan:35.1 | EMBL:ACUP02002128 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS |
| InterPro:EF_hand_dom | EnsemblPlantsGene:GLYMA_03G259100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | UniProt:I1JS16 |
| InterPro:IPR002048 | ProteinID:KRH68936.1 | EnsemblPlants:KRH68937 | ProteinID:KRH68937 | ProteinID:KRH68937.1 | PFAM:PF13833 |
| ScanProsite:PS00018 | PFscan:PS50222 | PANTHER:PTHR44180 | PANTHER:PTHR44180:SF7 | SUPFAM:SSF47473 | UniParc:UPI000233A7BA |
Description
hypothetical protein
Coordinates
chr3:+:45339581..45342694
Molecular Weight (calculated)
13923.6 Da
IEP (calculated)
3.875
GRAVY (calculated)
-0.255
Length
126 amino acids
Sequence
(BLAST)
(BLAST)
001: MESNQSAKEI TVEVEEFEDL LPVMAEKLDV ETFVSELCGG FKLLADPETG LITGESLMRN SAMLGMDGMS KEEAETMVRQ GDLDGDGKLN ETEFCILMVR
101: LSPGIMEDAE TWLHKALEQE LTKSST
101: LSPGIMEDAE TWLHKALEQE LTKSST
001: MEPTEKSMLL ETTSTTKMET KYEDMLPVMA EKMDVEEFVS ELCKGFSLLA DPERHLITAE SLRRNSGILG IEGMSKEDAQ GMVREGDLDG DGALNQTEFC
101: VLMVRLSPEM MEDAETWLEK ALTQELCNHN LSSMP
101: VLMVRLSPEM MEDAETWLEK ALTQELCNHN LSSMP
Arabidopsis Description
KICCalcium-binding protein KIC [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPX9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.