CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH40630

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G46600.1	KRH40630	AT4G20780.1	19720824

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH47865	Soybean	cytosol	96.0	96.0
KRH68937	Soybean	cytosol	76.8	76.19
KRG97213	Soybean	cytosol	75.2	74.6
Bra004524.1-P	Field mustard	cytosol	63.2	72.48
CDX80031	Canola	cytosol	63.2	72.48
VIT_15s0046g00070.t01	Wine grape	cytosol	73.6	72.44
Solyc10g009340.1.1	Tomato	cytosol	70.4	71.54
PGSC0003DMT400048609	Potato	cytosol	68.8	70.49
Bra000430.1-P	Field mustard	cytosol	64.0	67.8
CDY61726	Canola	cytosol	68.8	64.66
Bra039271.1-P	Field mustard	cytosol	68.8	64.66
CDY13397	Canola	cytosol	68.8	64.66
CDY27313	Canola	cytosol	68.0	63.91
AT2G46600.1	Thale cress	cytosol	68.0	62.96
GSMUA_Achr1P03980_001	Banana	cytosol	62.4	62.9
CDX83356	Canola	cytosol	64.8	60.45
CDX95707	Canola	cytosol	64.0	59.7
TraesCS6A01G065900.1	Wheat	cytosol	52.8	52.8
TraesCS6B01G088900.1	Wheat	cytosol	52.0	52.0
TraesCSU01G118100.1	Wheat	cytosol	52.0	51.59
KRH21601	Soybean	cytosol	46.4	50.88
KRH10720	Soybean	cytosol	46.4	50.88
CDY41540	Canola	cytosol	59.2	50.68
KRH55440	Soybean	cytosol	40.0	49.51
KRH22182	Soybean	cytosol	45.6	49.14
KRH25972	Soybean	cytosol	46.4	48.74
KRH27149	Soybean	cytosol	44.8	48.7
HORVU6Hr1G011970.2	Barley	cytosol	52.8	48.53
KRH26856	Soybean	cytosol	47.2	48.36
KRH25447	Soybean	cytosol	48.0	47.62
KRH22491	Soybean	cytosol	46.4	47.54
KRH55477	Soybean	cytosol	44.8	47.06
KRH26016	Soybean	cytosol	40.0	45.05
Os02t0122600-00	Rice	cytosol	52.8	44.9
KRH22173	Soybean	cytosol	38.4	38.71
Zm00001d053926_P001	Maize	cytosol	51.2	38.32
KRH27151	Soybean	cytosol	36.8	37.7

Protein Annotations

EMBL:ACUP02009834	EnsemblPlants:KRH06431	EnsemblPlantsGene:GLYMA_16G022400	EntrezGene:100802677	Gene3D:1.10.238.10	GO:GO:0003674
GO:GO:0005488	GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048
PANTHER:PTHR44180	PANTHER:PTHR44180:SF7	PFAM:PF13833	PFscan:PS50222	ProteinID:KRH06431	ProteinID:KRH06431.1
ScanProsite:PS00018	SUPFAM:SSF47473	UniParc:UPI000233B1DA	UniProt:K7MES4	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr16:-:2110759..2112025

Molecular Weight (calculated)

13862.4 Da

IEP (calculated)

3.923

GRAVY (calculated)

-0.390

Length

125 amino acids

Sequence
(BLAST)

001: MESSHNMRQS TMETEFEDLL PVMAEKLDVE SFVSELCGGF KLLSDPETGL ITSESLRTNS ALLGMEGMSK EDADAMVRQG DLDGDGKLNE TEFCILMVRL
101: SPGMMEDAES WLEKAIDEEL RKSSS

Best Arabidopsis Sequence Match ( AT2G46600.1 )
(BLAST)

001: MEPTEKSMLL ETTSTTKMET KYEDMLPVMA EKMDVEEFVS ELCKGFSLLA DPERHLITAE SLRRNSGILG IEGMSKEDAQ GMVREGDLDG DGALNQTEFC
101: VLMVRLSPEM MEDAETWLEK ALTQELCNHN LSSMP

Arabidopsis Description

KICCalcium-binding protein KIC [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPX9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.