Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G088900.1 | Wheat | cytosol | 96.0 | 96.0 |
| TraesCSU01G118100.1 | Wheat | cytosol | 93.6 | 92.86 |
| HORVU6Hr1G011970.2 | Barley | cytosol | 90.4 | 83.09 |
| Os02t0122600-00 | Rice | cytosol | 80.0 | 68.03 |
| GSMUA_Achr1P03980_001 | Banana | cytosol | 61.6 | 62.1 |
| Bra004524.1-P | Field mustard | cytosol | 49.6 | 56.88 |
| CDX80031 | Canola | cytosol | 49.6 | 56.88 |
| VIT_15s0046g00070.t01 | Wine grape | cytosol | 57.6 | 56.69 |
| Bra000430.1-P | Field mustard | cytosol | 51.2 | 54.24 |
| KRH47865 | Soybean | cytosol | 52.8 | 52.8 |
| KRH06431 | Soybean | cytosol | 52.8 | 52.8 |
| KRH68937 | Soybean | cytosol | 52.0 | 51.59 |
| CDY27313 | Canola | cytosol | 54.4 | 51.13 |
| PGSC0003DMT400048609 | Potato | cytosol | 49.6 | 50.82 |
| KRG97213 | Soybean | cytosol | 51.2 | 50.79 |
| Solyc10g009340.1.1 | Tomato | cytosol | 49.6 | 50.41 |
| TraesCS7A01G450400.1 | Wheat | cytosol | 50.4 | 50.4 |
| CDY61726 | Canola | cytosol | 53.6 | 50.38 |
| CDY13397 | Canola | cytosol | 53.6 | 50.38 |
| Bra039271.1-P | Field mustard | cytosol | 53.6 | 50.38 |
| Zm00001d053926_P001 | Maize | cytosol | 67.2 | 50.3 |
| AT2G46600.1 | Thale cress | cytosol | 53.6 | 49.63 |
| CDX83356 | Canola | cytosol | 52.0 | 48.51 |
| CDX95707 | Canola | cytosol | 51.2 | 47.76 |
| TraesCS3A01G315400.1 | Wheat | cytosol | 40.8 | 45.95 |
| CDY41540 | Canola | cytosol | 49.6 | 42.47 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:35.1 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005509 | GO:GO:0008150 | GO:GO:0009653 | GO:GO:0009987 | GO:GO:0010091 |
| GO:GO:0016043 | GO:GO:0030154 | InterPro:IPR002048 | PFAM:PF13833 | ScanProsite:PS00018 | PFscan:PS50222 |
| PANTHER:PTHR44180 | PANTHER:PTHR44180:SF7 | SUPFAM:SSF47473 | EnsemblPlantsGene:TraesCS6A01G065900 | EnsemblPlants:TraesCS6A01G065900.1 | SEG:seg |
Description
No Description!
Coordinates
chr6A:+:35254893..35255270
Molecular Weight (calculated)
12784.2 Da
IEP (calculated)
3.893
GRAVY (calculated)
0.083
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: MADEGAGAYE DLLPVMAGRL GTAGLLSELR AGFRLLADPA RGAITAESLR RSAGAVLGVE GMTAEEARAM VGEGDHDGDG ALSEQEFCVL MVRLSPGIMA
101: DAEGWLEEAI ADELVPPPPP PAPAA
101: DAEGWLEEAI ADELVPPPPP PAPAA
001: MEPTEKSMLL ETTSTTKMET KYEDMLPVMA EKMDVEEFVS ELCKGFSLLA DPERHLITAE SLRRNSGILG IEGMSKEDAQ GMVREGDLDG DGALNQTEFC
101: VLMVRLSPEM MEDAETWLEK ALTQELCNHN LSSMP
101: VLMVRLSPEM MEDAETWLEK ALTQELCNHN LSSMP
Arabidopsis Description
KICCalcium-binding protein KIC [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPX9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.