CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH40630

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G46600.1	KRH40630	AT4G20780.1	19720824

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH06431	Soybean	cytosol	96.0	96.0
KRH68937	Soybean	cytosol	79.2	78.57
KRG97213	Soybean	cytosol	77.6	76.98
CDX80031	Canola	cytosol	64.0	73.39
Bra004524.1-P	Field mustard	cytosol	64.0	73.39
VIT_15s0046g00070.t01	Wine grape	cytosol	73.6	72.44
Solyc10g009340.1.1	Tomato	cytosol	71.2	72.36
PGSC0003DMT400048609	Potato	cytosol	69.6	71.31
Bra000430.1-P	Field mustard	cytosol	64.0	67.8
Bra039271.1-P	Field mustard	cytosol	68.8	64.66
CDY61726	Canola	cytosol	68.8	64.66
CDY13397	Canola	cytosol	68.8	64.66
CDY27313	Canola	cytosol	68.0	63.91
AT2G46600.1	Thale cress	cytosol	68.0	62.96
GSMUA_Achr1P03980_001	Banana	cytosol	62.4	62.9
CDX83356	Canola	cytosol	65.6	61.19
CDX95707	Canola	cytosol	63.2	58.96
TraesCS6A01G065900.1	Wheat	cytosol	52.8	52.8
TraesCS6B01G088900.1	Wheat	cytosol	52.0	52.0
TraesCSU01G118100.1	Wheat	cytosol	52.0	51.59
CDY41540	Canola	cytosol	60.0	51.37
KRH10720	Soybean	cytosol	45.6	50.0
KRH21601	Soybean	cytosol	45.6	50.0
KRH55440	Soybean	cytosol	40.0	49.51
KRH27149	Soybean	cytosol	44.8	48.7
HORVU6Hr1G011970.2	Barley	cytosol	52.8	48.53
KRH26856	Soybean	cytosol	47.2	48.36
KRH22182	Soybean	cytosol	44.8	48.28
KRH25447	Soybean	cytosol	48.0	47.62
KRH22491	Soybean	cytosol	46.4	47.54
KRH25972	Soybean	cytosol	44.8	47.06
KRH55477	Soybean	cytosol	43.2	45.38
KRH26016	Soybean	cytosol	40.0	45.05
Os02t0122600-00	Rice	cytosol	52.8	44.9
KRH22173	Soybean	cytosol	38.4	38.71
Zm00001d053926_P001	Maize	cytosol	51.2	38.32
KRH27151	Soybean	cytosol	36.8	37.7

Protein Annotations

Gene3D:1.10.238.10	EntrezGene:100801586	MapMan:35.1	EMBL:ACUP02004176	EMBL:BT098766	UniProt:C6TM17
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	EnsemblPlantsGene:GLYMA_07G053300	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:IPR002048	EnsemblPlants:KRH47865	ProteinID:KRH47865	ProteinID:KRH47865.1	PFAM:PF13833
ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR44180	PANTHER:PTHR44180:SF7	SUPFAM:SSF47473	UniParc:UPI0001B1718D

Description

hypothetical protein

Coordinates

chr7:-:4669092..4670444

Molecular Weight (calculated)

13834.3 Da

IEP (calculated)

3.868

GRAVY (calculated)

-0.382

Length

125 amino acids

Sequence
(BLAST)

001: MESNHSMRQN TMETEFEDLL PVMAEKLDVE SFVSELCGGF KLLSDPETGL ITSESLRTNS ALLGMEGMSK EDAEAMVRQG DLDGDGKLNE TEFCILMVRL
101: SPGMMEDAES WLEKAIDEEL SKSSS

Best Arabidopsis Sequence Match ( AT2G46600.1 )
(BLAST)

001: MEPTEKSMLL ETTSTTKMET KYEDMLPVMA EKMDVEEFVS ELCKGFSLLA DPERHLITAE SLRRNSGILG IEGMSKEDAQ GMVREGDLDG DGALNQTEFC
101: VLMVRLSPEM MEDAETWLEK ALTQELCNHN LSSMP

Arabidopsis Description

KICCalcium-binding protein KIC [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPX9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.