CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH26856	Soybean	cytosol	90.16	90.16
KRH25447	Soybean	cytosol	72.13	69.84
VIT_12s0134g00240.t01	Wine grape	cytosol	65.57	68.97
Solyc07g053050.1.1	Tomato	cytosol	60.66	63.79
KRH27149	Soybean	cytosol	57.38	60.87
KRH22182	Soybean	cytosol	57.38	60.34
PGSC0003DMT400067274	Potato	cytosol	58.2	59.66
Os01t0783700-01	Rice	cytosol	54.1	59.46
Solyc02g079720.1.1	Tomato	cytosol	50.82	57.94
PGSC0003DMT400036057	Potato	cytosol	53.28	56.52
GSMUA_Achr7P27110_001	Banana	cytosol	53.28	56.03
GSMUA_Achr9P30020_001	Banana	cytosol	51.64	55.75
GSMUA_Achr3P23000_001	Banana	cytosol	48.36	55.66
KRH25972	Soybean	cytosol	54.1	55.46
GSMUA_Achr8P01460_001	Banana	cytosol	50.82	55.36
KRH21601	Soybean	cytosol	51.64	55.26
TraesCS3A01G315400.1	Wheat	cytosol	50.0	54.95
KRH10720	Soybean	cytosol	50.82	54.39
TraesCS3B01G351500.1	Wheat	cytosol	49.18	54.05
KXG33526	Sorghum	cytosol	45.08	53.92
KRH55477	Soybean	cytosol	52.46	53.78
Zm00001d043258_P001	Maize	cytosol	40.98	53.76
TraesCS3D01G316100.1	Wheat	cytosol	48.36	53.15
Zm00001d031419_P001	Maize	cytosol	47.54	52.73
KXG25648	Sorghum	cytosol	45.9	50.91
KRH55440	Soybean	cytosol	41.8	50.49
KRH68937	Soybean	cytosol	50.0	48.41
GSMUA_Achr5P26360_001	Banana	cytosol	46.72	48.31
TraesCS7A01G450400.1	Wheat	cytosol	49.18	48.0
Os06t0683400-02	Rice	cytosol	48.36	47.2
EER88832	Sorghum	cytosol	50.0	46.92
KRH26016	Soybean	cytosol	42.62	46.85
KRG97213	Soybean	cytosol	48.36	46.83
TraesCS7B01G350200.1	Wheat	cytosol	49.18	46.51
KRH06431	Soybean	cytosol	47.54	46.4
KRH47865	Soybean	cytosol	47.54	46.4
KRH22173	Soybean	cytosol	45.9	45.16
KRH27151	Soybean	cytosol	45.08	45.08
TraesCS7D01G439800.1	Wheat	cytosol	49.18	44.78
HORVU3Hr1G077070.1	Barley	cytosol	48.36	44.7
Zm00001d014491_P001	Maize	cytosol	48.36	44.7
HORVU7Hr1G101740.2	Barley	cytosol, plastid	34.43	26.09

Protein Annotations

Gene3D:1.10.238.10	EntrezGene:100818434	MapMan:35.1	EMBL:ACUP02008415	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	EnsemblPlantsGene:GLYMA_13G303900	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	UniProt:I1M3Z8
InterPro:IPR002048	EnsemblPlants:KRH22491	ProteinID:KRH22491	ProteinID:KRH22491.1	PFAM:PF13833	ScanProsite:PS00018
PFscan:PS50222	PANTHER:PTHR44180	PANTHER:PTHR44180:SF6	SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI000233BF00
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:40099294..40100258

Molecular Weight (calculated)

13715.9 Da

IEP (calculated)

4.524

GRAVY (calculated)

-0.150

Length

122 amino acids

Sequence
(BLAST)

001: MAGIGKGSVE FEDLLPVIAG KLGGEGLIKE LCKGFRLLMD KEKGVITLES LRRNSAMMGL QDLKEEELAS MMREGDLDSD GVLSEMEFCV LMFRLSPQLM
101: KDSWFWLQQA MHQELNNNVT KS

Best Arabidopsis Sequence Match ( AT5G54490.1 )
(BLAST)

001: MASPKSSTRP NQENQEPQFQ DFFPTMAGKL GGEGLIEEIC KGFELLMDKD KGVITFESLR RNASTVLGLG DLTDDDVRYM INEGDFDRDG ALNQMEFCVL
101: MFRLSPELME ASRCVVTEVI EEEFYRH

Arabidopsis Description

PBP1PBP1 [Source:UniProtKB/TrEMBL;Acc:A0A178URF6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.