Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plasma membrane 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g053050.1.1 | Tomato | cytosol | 89.08 | 91.38 |
| VIT_12s0134g00240.t01 | Wine grape | cytosol | 71.43 | 73.28 |
| PGSC0003DMT400064403 | Potato | cytosol | 66.39 | 67.52 |
| PGSC0003DMT400064404 | Potato | cytosol | 67.23 | 65.57 |
| KRH25447 | Soybean | cytosol | 68.07 | 64.29 |
| TraesCS3A01G315400.1 | Wheat | cytosol | 57.98 | 62.16 |
| GSMUA_Achr9P30020_001 | Banana | cytosol | 58.82 | 61.95 |
| KXG33526 | Sorghum | cytosol | 52.94 | 61.76 |
| KRH26856 | Soybean | cytosol | 63.03 | 61.48 |
| Os01t0783700-01 | Rice | cytosol | 57.14 | 61.26 |
| GSMUA_Achr7P27110_001 | Banana | cytosol | 59.66 | 61.21 |
| TraesCS3B01G351500.1 | Wheat | cytosol | 56.3 | 60.36 |
| GSMUA_Achr8P01460_001 | Banana | cytosol | 56.3 | 59.82 |
| TraesCS3D01G316100.1 | Wheat | cytosol | 55.46 | 59.46 |
| GSMUA_Achr3P23000_001 | Banana | cytosol | 52.94 | 59.43 |
| PGSC0003DMT400012996 | Potato | cytosol | 57.14 | 59.13 |
| KRH22491 | Soybean | cytosol | 59.66 | 58.2 |
| Zm00001d043258_P001 | Maize | cytosol | 45.38 | 58.06 |
| PGSC0003DMT400057519 | Potato | cytosol | 55.46 | 57.39 |
| KXG25648 | Sorghum | cytosol | 52.94 | 57.27 |
| GSMUA_Achr5P26360_001 | Banana | cytosol | 56.3 | 56.78 |
| Zm00001d031419_P001 | Maize | cytosol | 52.1 | 56.36 |
| PGSC0003DMT400036057 | Potato | cytosol | 53.78 | 55.65 |
| PGSC0003DMT400049542 | Potato | cytosol | 50.42 | 53.1 |
| EER88832 | Sorghum | cytosol | 53.78 | 49.23 |
| PGSC0003DMT400064349 | Potato | cytosol | 47.9 | 48.31 |
| Os06t0683400-02 | Rice | cytosol | 50.42 | 48.0 |
| TraesCS7A01G450400.1 | Wheat | cytosol | 50.42 | 48.0 |
| HORVU3Hr1G077070.1 | Barley | cytosol | 52.94 | 47.73 |
| TraesCS7B01G350200.1 | Wheat | cytosol | 51.26 | 47.29 |
| Zm00001d014491_P001 | Maize | cytosol | 52.1 | 46.97 |
| PGSC0003DMT400048609 | Potato | cytosol | 46.22 | 45.08 |
| TraesCS7D01G439800.1 | Wheat | cytosol | 50.42 | 44.78 |
| HORVU7Hr1G101740.2 | Barley | cytosol, plastid | 37.82 | 27.95 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400067274 | EnsemblPlantsGene:PGSC0003DMG400026159 | EntrezGene:102601995 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR44180 |
| PANTHER:PTHR44180:SF1 | PFAM:PF13833 | PFscan:PS50222 | PGSC:PGSC0003DMG400026159 | RefSeq:XP_006360544.1 | ScanProsite:PS00018 |
| SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI0002965F26 | UniProt:M1CH03 | MapMan:35.1 | : |
Description
Ccd1 [Source:PGSC_GENE;Acc:PGSC0003DMG400026159]
Coordinates
chr7:-:47693444..47694187
Molecular Weight (calculated)
13526.4 Da
IEP (calculated)
4.222
GRAVY (calculated)
-0.341
Length
119 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGTKTNDFQ DMLPMMANKL GGDGLIRELC NGFRLLMDEE RGVITFESLK KNSALLGLQN LRDDELMSML REGDLNGDGH LDQMEFCVLM FRLSPELMEE
101: SEDLLEIALQ HEFKPNSAR
101: SEDLLEIALQ HEFKPNSAR
001: MASPKSPTRP TQQNPQPNFH DFLPTMAGNL GGEGLIGELC NGFELLMDRE KGVITFESLR RNAAAVLGLG DLTDEDVRCM IKEGDFDCDG ALNQMEFCVL
101: MFRLSPDLME ASRCLVTEVI EEEFGFTRRH
101: MFRLSPDLME ASRCLVTEVI EEEFGFTRRH
Arabidopsis Description
KRP1Calcium-binding protein KRP1 [Source:UniProtKB/Swiss-Prot;Acc:O81831]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.