CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER93759
OQU79615

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G54490.1	EER93759	AT2G34650.1	12857841
AT5G54490.1	OQU79615	AT2G34650.1	12857841

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014491_P001	Maize	cytosol	91.54	90.15
Os06t0683400-02	Rice	cytosol	81.54	84.8
TraesCS7A01G450400.1	Wheat	cytosol	81.54	84.8
TraesCS7B01G350200.1	Wheat	cytosol	83.85	84.5
TraesCS7D01G439800.1	Wheat	cytosol	82.31	79.85
GSMUA_Achr3P23000_001	Banana	cytosol	56.92	69.81
GSMUA_Achr5P26360_001	Banana	cytosol	58.46	64.41
VIT_12s0134g00240.t01	Wine grape	cytosol	53.08	59.48
VIT_00s0347g00040.t01	Wine grape	cytosol	50.0	57.52
VIT_19s0014g03970.t01	Wine grape	cytosol	47.69	57.41
KXG25648	Sorghum	cytosol	48.46	57.27
PGSC0003DMT400064403	Potato	cytosol	51.54	57.27
KRH22182	Soybean	cytosol	50.77	56.9
KRH21601	Soybean	cytosol	49.23	56.14
KRH10720	Soybean	cytosol	49.23	56.14
Solyc03g006710.1.1	Tomato	cytosol	49.23	55.65
KRH27149	Soybean	cytosol	49.23	55.65
KRH55440	Soybean	cytosol	43.08	55.45
KRH25972	Soybean	cytosol	50.0	54.62
Solyc07g053050.1.1	Tomato	cytosol	48.46	54.31
PGSC0003DMT400064404	Potato	cytosol	50.77	54.1
Solyc10g006700.1.1	Tomato	cytosol	50.77	54.1
PGSC0003DMT400049542	Potato	cytosol	46.92	53.98
PGSC0003DMT400012996	Potato	cytosol	47.69	53.91
PGSC0003DMT400067274	Potato	cytosol	49.23	53.78
Solyc07g063690.1.1	Tomato	cytosol	46.15	53.1
Solyc02g079520.1.1	Tomato	nucleus	46.92	53.04
PGSC0003DMT400057519	Potato	cytosol	46.92	53.04
KXG33526	Sorghum	cytosol	41.54	52.94
VIT_02s0012g00640.t01	Wine grape	cytosol	45.38	52.68
KRH55477	Soybean	cytosol	47.69	52.1
Solyc10g006660.2.1	Tomato	cytosol	51.54	51.94
KRH26016	Soybean	cytosol	43.85	51.35
VIT_02s0012g00650.t01	Wine grape	cytosol	43.08	50.45
CDY29293	Canola	cytosol	49.23	50.39
KRH26856	Soybean	cytosol	46.92	50.0
KRH22491	Soybean	cytosol	46.92	50.0
HORVU7Hr1G101740.2	Barley	cytosol, plastid	61.54	49.69
KRH25447	Soybean	cytosol	47.69	49.21
AT4G27280.1	Thale cress	cytosol	48.46	48.46
KRH22173	Soybean	cytosol	46.15	48.39
VIT_02s0012g00660.t01	Wine grape	cytosol	44.62	48.33
PGSC0003DMT400064349	Potato	cytosol	43.85	48.31
CDY48640	Canola	cytosol	48.46	48.09
Solyc02g079720.1.1	Tomato	cytosol	39.23	47.66
CDY42456	Canola	cytosol	47.69	47.33
Bra002984.1-P	Field mustard	cytosol	47.69	47.33
Bra022723.1-P	Field mustard	cytosol	47.69	47.33
CDY28767	Canola	cytosol	47.69	47.33
CDY61745	Canola	cytosol	47.69	47.33
AT5G54490.1	Thale cress	cytosol	46.15	47.24
KRH27151	Soybean	cytosol	43.08	45.9
PGSC0003DMT400036057	Potato	cytosol	38.46	43.48
VIT_19s0014g04650.t01	Wine grape	cytosol	50.0	43.33
Solyc10g006740.2.1	Tomato	extracellular	41.54	36.99
CDX89262	Canola	cytosol, peroxisome, plastid	49.23	23.53
Bra026364.1-P	Field mustard	cytosol	48.46	21.58

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	EntrezGene:8061631	UniProt:C5Z878	EnsemblPlants:EER88832	ProteinID:EER88832
ProteinID:EER88832.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:IPR002048	PFAM:PF13833	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR44180
PANTHER:PTHR44180:SF5	EnsemblPlantsGene:SORBI_3010G234000	SUPFAM:SSF47473	unigene:Sbi.18132	UniParc:UPI0001A88FD9	RefSeq:XP_002437465.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:57660661..57662280

Molecular Weight (calculated)

14188.9 Da

IEP (calculated)

4.037

GRAVY (calculated)

-0.079

Length

130 amino acids

Sequence
(BLAST)

001: MASHQQQQAG AAAAAASVDF EDYLPVMAER LGEDGLMREL ASGFRLLMDP ARGLITFDSL RRNAPLLGLG GMSDADLRGM LAEGDFDGDG ALSEMEFCVL
101: MVRLSPELMD EPRRWLDDAV DQASRFLFTS

Best Arabidopsis Sequence Match ( AT2G46600.1 )
(BLAST)

001: MEPTEKSMLL ETTSTTKMET KYEDMLPVMA EKMDVEEFVS ELCKGFSLLA DPERHLITAE SLRRNSGILG IEGMSKEDAQ GMVREGDLDG DGALNQTEFC
101: VLMVRLSPEM MEDAETWLEK ALTQELCNHN LSSMP

Arabidopsis Description

KICCalcium-binding protein KIC [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPX9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.