Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400057519 | Potato | cytosol | 93.91 | 93.91 |
| Solyc03g006710.1.1 | Tomato | cytosol | 73.91 | 73.91 |
| KRH10720 | Soybean | cytosol | 66.96 | 67.54 |
| KRH21601 | Soybean | cytosol | 65.22 | 65.79 |
| GSMUA_Achr3P23000_001 | Banana | cytosol | 55.65 | 60.38 |
| VIT_00s0347g00040.t01 | Wine grape | cytosol | 58.26 | 59.29 |
| Solyc07g053050.1.1 | Tomato | cytosol | 59.13 | 58.62 |
| GSMUA_Achr5P26360_001 | Banana | cytosol | 57.39 | 55.93 |
| GSMUA_Achr9P30020_001 | Banana | cytosol | 54.78 | 55.75 |
| Os01t0783700-01 | Rice | cytosol | 53.04 | 54.95 |
| TraesCS3A01G315400.1 | Wheat | cytosol | 52.17 | 54.05 |
| GSMUA_Achr7P27110_001 | Banana | cytosol | 53.91 | 53.45 |
| TraesCS3D01G316100.1 | Wheat | cytosol | 51.3 | 53.15 |
| TraesCS3B01G351500.1 | Wheat | cytosol | 51.3 | 53.15 |
| Solyc07g063690.1.1 | Tomato | cytosol | 51.3 | 52.21 |
| KXG33526 | Sorghum | cytosol | 45.22 | 50.98 |
| Os06t0683400-02 | Rice | cytosol | 54.78 | 50.4 |
| Solyc02g079720.1.1 | Tomato | cytosol | 46.09 | 49.53 |
| GSMUA_Achr8P01460_001 | Banana | cytosol | 47.83 | 49.11 |
| TraesCS7A01G450400.1 | Wheat | cytosol | 53.04 | 48.8 |
| Zm00001d043258_P001 | Maize | cytosol | 39.13 | 48.39 |
| KXG25648 | Sorghum | cytosol | 46.09 | 48.18 |
| Zm00001d031419_P001 | Maize | cytosol | 46.09 | 48.18 |
| TraesCS7B01G350200.1 | Wheat | cytosol | 53.91 | 48.06 |
| Solyc10g006700.1.1 | Tomato | cytosol | 50.43 | 47.54 |
| Solyc10g006660.2.1 | Tomato | cytosol | 53.04 | 47.29 |
| Zm00001d014491_P001 | Maize | cytosol | 53.91 | 46.97 |
| EER88832 | Sorghum | cytosol | 53.04 | 46.92 |
| TraesCS7D01G439800.1 | Wheat | cytosol | 53.91 | 46.27 |
| HORVU3Hr1G077070.1 | Barley | cytosol | 50.43 | 43.94 |
| Solyc10g009340.1.1 | Tomato | cytosol | 43.48 | 40.65 |
| Solyc10g006740.2.1 | Tomato | extracellular | 48.7 | 38.36 |
| HORVU7Hr1G101740.2 | Barley | cytosol, plastid | 39.13 | 27.95 |
Protein Annotations
| EnsemblPlants:Solyc02g079520.1.1 | EnsemblPlantsGene:Solyc02g079520.1 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR44180 | PANTHER:PTHR44180:SF4 |
| PFAM:PF13833 | PFscan:PS50222 | ScanProsite:PS00018 | SUPFAM:SSF47473 | UniParc:UPI0002768A3B | UniProt:K4B9H3 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2:-:44055536..44055883
Molecular Weight (calculated)
13262.2 Da
IEP (calculated)
4.181
GRAVY (calculated)
-0.229
Length
115 amino acids
Sequence
(BLAST)
(BLAST)
001: MATLGRDVVF EDFFPSMMEK LGSEGFLKEL KNGFRALMDK EREVITFESL KRNSALLGLE GMSDDELMCM LREGDLNGDD CLNEKEFCVL MVRLSPDLME
101: KSRMWFAQSI ENDLM
101: KSRMWFAQSI ENDLM
001: MEPTEKSMLL ETTSTTKMET KYEDMLPVMA EKMDVEEFVS ELCKGFSLLA DPERHLITAE SLRRNSGILG IEGMSKEDAQ GMVREGDLDG DGALNQTEFC
101: VLMVRLSPEM MEDAETWLEK ALTQELCNHN LSSMP
101: VLMVRLSPEM MEDAETWLEK ALTQELCNHN LSSMP
Arabidopsis Description
KICCalcium-binding protein KIC [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPX9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.