Factsheet for Solyc07g063690.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400049542	Potato	cytosol	92.04	92.04
VIT_19s0014g03970.t01	Wine grape	cytosol	68.14	71.3
KRH55440	Soybean	cytosol	62.83	70.3
VIT_02s0012g00640.t01	Wine grape	cytosol	65.49	66.07
VIT_02s0012g00650.t01	Wine grape	cytosol	63.72	64.86
KRH26016	Soybean	cytosol	62.83	63.96
VIT_02s0012g00660.t01	Wine grape	cytosol	62.83	59.17
GSMUA_Achr3P23000_001	Banana	cytosol	53.1	56.6
KRH22173	Soybean	cytosol	61.06	55.65
Os01t0783700-01	Rice	cytosol	53.98	54.95
KRH27151	Soybean	cytosol	59.29	54.92
Zm00001d043258_P001	Maize	cytosol	45.13	54.84
GSMUA_Achr5P26360_001	Banana	cytosol	56.64	54.24
GSMUA_Achr9P30020_001	Banana	cytosol	53.98	53.98
KXG33526	Sorghum	cytosol	48.67	53.92
Solyc07g053050.1.1	Tomato	cytosol	54.87	53.45
TraesCS3A01G315400.1	Wheat	cytosol	52.21	53.15
TraesCS3D01G316100.1	Wheat	cytosol	52.21	53.15
TraesCS3B01G351500.1	Wheat	cytosol	52.21	53.15
Solyc03g006710.1.1	Tomato	cytosol	53.98	53.04
GSMUA_Achr7P27110_001	Banana	cytosol	53.98	52.59
KXG25648	Sorghum	cytosol	50.44	51.82
Solyc02g079520.1.1	Tomato	nucleus	52.21	51.3
GSMUA_Achr8P01460_001	Banana	cytosol	50.44	50.89
TraesCS7A01G450400.1	Wheat	cytosol	55.75	50.4
Os06t0683400-02	Rice	cytosol	55.75	50.4
Solyc10g006740.2.1	Tomato	extracellular	64.6	50.0
Solyc10g006700.1.1	Tomato	cytosol	53.1	49.18
Zm00001d031419_P001	Maize	cytosol	47.79	49.09
TraesCS7B01G350200.1	Wheat	cytosol	55.75	48.84
Solyc10g006660.2.1	Tomato	cytosol	53.98	47.29
TraesCS7D01G439800.1	Wheat	cytosol	55.75	47.01
Solyc02g079720.1.1	Tomato	cytosol	44.25	46.73
EER88832	Sorghum	cytosol	53.1	46.15
Zm00001d014491_P001	Maize	cytosol	53.1	45.45
HORVU3Hr1G077070.1	Barley	cytosol	51.33	43.94
Solyc10g009340.1.1	Tomato	cytosol	42.48	39.02
HORVU7Hr1G101740.2	Barley	cytosol, plastid	42.48	29.81

Protein Annotations

EnsemblPlants:Solyc07g063690.1.1	EnsemblPlantsGene:Solyc07g063690.1	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR44180	PANTHER:PTHR44180:SF2
PFAM:PF13833	PFscan:PS50222	ScanProsite:PS00018	SUPFAM:SSF47473	UniParc:UPI000276C028	UniProt:K4CH52
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr7:-:66088302..66088643

Molecular Weight (calculated)

12875.6 Da

IEP (calculated)

3.888

GRAVY (calculated)

-0.098

Length

113 amino acids

Sequence
(BLAST)

001: MEDPYGFEDH FPSMMERLGA EGFMRELCNG FCLLMDVSIG LITYESLKRN TMNLGLNDLR DDELIYMLAE GDLDGDGALN QMEFCILMFR LSPGLMDGSK
101: QYMDDVGLIH FQP

Best Arabidopsis Sequence Match ( AT5G54490.1 )
(BLAST)

001: MASPKSSTRP NQENQEPQFQ DFFPTMAGKL GGEGLIEEIC KGFELLMDKD KGVITFESLR RNASTVLGLG DLTDDDVRYM INEGDFDRDG ALNQMEFCVL
101: MFRLSPELME ASRCVVTEVI EEEFYRH

Arabidopsis Description

PBP1PBP1 [Source:UniProtKB/TrEMBL;Acc:A0A178URF6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.