Factsheet for VIT_19s0014g03970.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0012g00650.t01	Wine grape	cytosol	86.11	83.78
VIT_02s0012g00640.t01	Wine grape	cytosol	84.26	81.25
VIT_02s0012g00660.t01	Wine grape	cytosol	87.04	78.33
KRH55440	Soybean	cytosol	71.3	76.24
KRH26016	Soybean	cytosol	71.3	69.37
PGSC0003DMT400049542	Potato	cytosol	72.22	69.03
Solyc07g063690.1.1	Tomato	cytosol	71.3	68.14
VIT_00s0347g00040.t01	Wine grape	cytosol	69.44	66.37
KRH27151	Soybean	cytosol	68.52	60.66
KRH22173	Soybean	cytosol	69.44	60.48
VIT_12s0134g00240.t01	Wine grape	cytosol	64.81	60.34
PGSC0003DMT400064349	Potato	cytosol	65.74	60.17
GSMUA_Achr3P23000_001	Banana	cytosol	56.48	57.55
GSMUA_Achr9P30020_001	Banana	cytosol	57.41	54.87
Os01t0783700-01	Rice	cytosol	55.56	54.05
TraesCS3D01G316100.1	Wheat	cytosol	55.56	54.05
TraesCS3B01G351500.1	Wheat	cytosol	55.56	54.05
GSMUA_Achr7P27110_001	Banana	cytosol	57.41	53.45
TraesCS3A01G315400.1	Wheat	cytosol	54.63	53.15
KXG33526	Sorghum	cytosol	50.0	52.94
Zm00001d043258_P001	Maize	cytosol	45.37	52.69
TraesCS7A01G450400.1	Wheat	cytosol	60.19	52.0
Os06t0683400-02	Rice	cytosol	60.19	52.0
KXG25648	Sorghum	cytosol	51.85	50.91
Zm00001d031419_P001	Maize	cytosol	51.85	50.91
GSMUA_Achr8P01460_001	Banana	cytosol	52.78	50.89
TraesCS7B01G350200.1	Wheat	cytosol	60.19	50.39
GSMUA_Achr5P26360_001	Banana	cytosol	54.63	50.0
TraesCS7D01G439800.1	Wheat	cytosol	60.19	48.51
Solyc10g006740.2.1	Tomato	extracellular	64.81	47.95
EER88832	Sorghum	cytosol	57.41	47.69
Zm00001d014491_P001	Maize	cytosol	56.48	46.21
VIT_19s0014g04650.t01	Wine grape	cytosol	62.96	45.33
VIT_15s0046g00070.t01	Wine grape	cytosol	51.85	44.09
HORVU3Hr1G077070.1	Barley	cytosol	53.7	43.94
HORVU7Hr1G101740.2	Barley	cytosol, plastid	45.37	30.43

Protein Annotations

Gene3D:1.10.238.10	EntrezGene:100252031	wikigene:100252031	MapMan:35.1	EMBL:AM456440	ProteinID:CAN74469
ProteinID:CAN74469.1	ProteinID:CCB46405	ProteinID:CCB46405.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom
UniProt:F6H285	EMBL:FN595229	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	InterPro:IPR002048
EntrezGene:LOC100252031	wikigene:LOC100252031	PFAM:PF13833	ScanProsite:PS00018	PANTHER:PTHR44180	PANTHER:PTHR44180:SF2
SUPFAM:SSF47473	TIGR:TC53352	UniParc:UPI000210A94E	ArrayExpress:VIT_19s0014g03970	EnsemblPlantsGene:VIT_19s0014g03970	EnsemblPlants:VIT_19s0014g03970.t01
unigene:Vvi.5825	RefSeq:XP_002284268	RefSeq:XP_002284268.1	:	:	:

Description

No Description!

Coordinates

chr19:-:4197164..4200139

Molecular Weight (calculated)

12154.8 Da

IEP (calculated)

3.722

GRAVY (calculated)

0.107

Length

108 amino acids

Sequence
(BLAST)

001: MEVEGGVQFE DYFPSMIERL GAEGFIVELC NGFHLLMDVE KGLITFESLR RNTILLGLQD MGDDELVCML SEGDLDGDGA LNQMEFCILM FRLSPGLMDG
101: PKQWVEEI

Best Arabidopsis Sequence Match ( AT5G54490.1 )
(BLAST)

001: MASPKSSTRP NQENQEPQFQ DFFPTMAGKL GGEGLIEEIC KGFELLMDKD KGVITFESLR RNASTVLGLG DLTDDDVRYM INEGDFDRDG ALNQMEFCVL
101: MFRLSPELME ASRCVVTEVI EEEFYRH

Arabidopsis Description

PBP1PBP1 [Source:UniProtKB/TrEMBL;Acc:A0A178URF6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.