Factsheet for Bra026364.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 3
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89262	Canola	cytosol, peroxisome, plastid	92.12	98.9
CDY29293	Canola	cytosol	42.12	96.85
AT4G27280.1	Thale cress	cytosol	39.38	88.46
Bra022723.1-P	Field mustard	cytosol	36.3	80.92
Bra002984.1-P	Field mustard	cytosol	35.62	79.39
PGSC0003DMT400064403	Potato	cytosol	26.03	64.96
PGSC0003DMT400064404	Potato	cytosol	26.03	62.3
Solyc10g006700.1.1	Tomato	cytosol	25.68	61.48
GSMUA_Achr3P23000_001	Banana	cytosol	22.26	61.32
KRH22182	Soybean	cytosol	24.32	61.21
KRH27149	Soybean	cytosol	23.97	60.87
KRH25972	Soybean	cytosol	24.32	59.66
Solyc10g006660.2.1	Tomato	cytosol	26.03	58.91
GSMUA_Achr7P27110_001	Banana	cytosol	23.29	58.62
Os01t0783700-01	Rice	cytosol	22.26	58.56
TraesCS3A01G315400.1	Wheat	cytosol	21.58	56.76
KRH55477	Soybean	cytosol	22.95	56.3
TraesCS3B01G351500.1	Wheat	cytosol	21.23	55.86
Zm00001d031419_P001	Maize	cytosol	20.89	55.45
GSMUA_Achr8P01460_001	Banana	cytosol	20.89	54.46
TraesCS3D01G316100.1	Wheat	cytosol	20.55	54.05
KXG33526	Sorghum	cytosol	18.84	53.92
KXG25648	Sorghum	cytosol	20.21	53.64
GSMUA_Achr9P30020_001	Banana	cytosol	20.55	53.1
Os06t0683400-02	Rice	cytosol	22.6	52.8
TraesCS7A01G450400.1	Wheat	cytosol	22.6	52.8
Zm00001d043258_P001	Maize	cytosol	16.78	52.69
GSMUA_Achr5P26360_001	Banana	cytosol	21.23	52.54
TraesCS7B01G350200.1	Wheat	cytosol	22.6	51.16
VIT_19s0014g04650.t01	Wine grape	cytosol	25.34	49.33
TraesCS7D01G439800.1	Wheat	cytosol	22.6	49.25
EER88832	Sorghum	cytosol	21.58	48.46
Zm00001d014491_P001	Maize	cytosol	21.23	46.97
Bra000430.1-P	Field mustard	cytosol	18.84	46.61
HORVU3Hr1G077070.1	Barley	cytosol	20.55	45.45
Bra004524.1-P	Field mustard	cytosol	16.78	44.95
Bra039271.1-P	Field mustard	cytosol	19.18	42.11
HORVU7Hr1G101740.2	Barley	cytosol, plastid	17.81	32.3

Protein Annotations

KEGG:00130+1.6.5.2	Gene3D:1.10.238.10	Gene3D:3.40.50.360	MapMan:35.1	EnsemblPlantsGene:Bra026364	EnsemblPlants:Bra026364.1
EnsemblPlants:Bra026364.1-P	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FMN_Rdtase-like	InterPro:Flavoprotein-like_sf
InterPro:Flavoprotein_WrbA-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003955	GO:GO:0005488
GO:GO:0005509	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114
InterPro:IPR002048	InterPro:IPR029039	UniProt:M4EC55	PFAM:PF03358	PFAM:PF13833	ScanProsite:PS00018
PFscan:PS50222	PANTHER:PTHR30546	PANTHER:PTHR30546:SF5	SUPFAM:SSF47473	SUPFAM:SSF52218	TIGRFAMs:TIGR01755
UniParc:UPI0002545B04	SEG:seg	:	:	:	:

Description

AT4G27270 (E=2e-062) | quinone reductase family protein

Coordinates

chrA01:-:9782542..9784553

Molecular Weight (calculated)

31205.5 Da

IEP (calculated)

4.498

GRAVY (calculated)

-0.059

Length

292 amino acids

Sequence
(BLAST)

001: MASPKSPTRP TQQNPEPSFH DFLPAMAGKL GGEGLIGELC NGFELLMDRG KGVFTFESLR RNAAAVLGLG DLTDEDVRSM IKEGDFDCDG ALNQMEFCVL
101: MFRLSPDLMD ASRCLVTEAI EEEYGRMSEP PLFSLVTLPE DVLSKMSAPP KSDAPLITPN DLAEADGFVF AFPTRFGMMA AQFKAFLDST GGLWRTQQLA
201: GKPAAGIFYS TGSQGGGQET TALTAITQLV HHVMIFVPMG YTFGAGMFEM EKVKGGIPYG AGTFAGDGSR QPTEVGIGVG ASIPPGEVHC RH

Best Arabidopsis Sequence Match ( AT4G27270.2 )
(BLAST)

001: MYGHVEKLAQ EIRKGAASVD GVEAILWQVP ETLQEDVLSK MSAPPKSDAP IITPNELAEA DGFIFGFPTR FGMMAAQFKA FLDATGGLWR TQQLAGKPAG
101: IFYSTGSQGG GQETTALTAI TQLVHHGMIF VPIGYTFGAG MFEMENVKGG SPYGAGTFAG DGSRQPTELE LGQAFHQGKY IAAISKKLKG PAAA

Arabidopsis Description

Probable NAD(P)H dehydrogenase (quinone) FQR1-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q6NQE2]
SUBAcon: [mitochondrion,peroxisome,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.