Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plasma membrane 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH25972 | Soybean | cytosol | 91.6 | 91.6 |
| KRH27149 | Soybean | cytosol | 74.79 | 77.39 |
| KRH22182 | Soybean | cytosol | 73.95 | 75.86 |
| PGSC0003DMT400064403 | Potato | cytosol | 62.18 | 63.25 |
| Solyc10g006700.1.1 | Tomato | cytosol | 62.18 | 60.66 |
| PGSC0003DMT400064404 | Potato | cytosol | 62.18 | 60.66 |
| GSMUA_Achr3P23000_001 | Banana | cytosol | 53.78 | 60.38 |
| TraesCS3A01G315400.1 | Wheat | cytosol | 53.78 | 57.66 |
| Solyc10g006660.2.1 | Tomato | cytosol | 62.18 | 57.36 |
| KRH25447 | Soybean | cytosol | 60.5 | 57.14 |
| GSMUA_Achr8P01460_001 | Banana | cytosol | 53.78 | 57.14 |
| TraesCS3B01G351500.1 | Wheat | cytosol | 52.94 | 56.76 |
| KRH21601 | Soybean | cytosol | 53.78 | 56.14 |
| VIT_19s0014g04650.t01 | Wine grape | cytosol | 70.59 | 56.0 |
| GSMUA_Achr7P27110_001 | Banana | cytosol | 53.78 | 55.17 |
| Os01t0783700-01 | Rice | cytosol | 51.26 | 54.95 |
| TraesCS3D01G316100.1 | Wheat | cytosol | 51.26 | 54.95 |
| GSMUA_Achr9P30020_001 | Banana | cytosol | 52.1 | 54.87 |
| KRH10720 | Soybean | cytosol | 52.1 | 54.39 |
| KRH55440 | Soybean | cytosol | 45.38 | 53.47 |
| CDY28767 | Canola | cytosol | 58.82 | 53.44 |
| GSMUA_Achr5P26360_001 | Banana | cytosol | 52.94 | 53.39 |
| AT4G27280.1 | Thale cress | cytosol | 57.98 | 53.08 |
| CDY29293 | Canola | cytosol | 56.3 | 52.76 |
| Bra022723.1-P | Field mustard | cytosol | 57.98 | 52.67 |
| KRH26856 | Soybean | cytosol | 53.78 | 52.46 |
| KRH22491 | Soybean | cytosol | 53.78 | 52.46 |
| AT5G54490.1 | Thale cress | cytosol | 55.46 | 51.97 |
| KXG33526 | Sorghum | cytosol | 44.54 | 51.96 |
| CDY48640 | Canola | cytosol | 57.14 | 51.91 |
| KXG25648 | Sorghum | cytosol | 47.9 | 51.82 |
| Zm00001d043258_P001 | Maize | cytosol | 39.5 | 50.54 |
| Zm00001d031419_P001 | Maize | cytosol | 46.22 | 50.0 |
| Bra002984.1-P | Field mustard | cytosol | 54.62 | 49.62 |
| CDY42456 | Canola | cytosol | 54.62 | 49.62 |
| CDY61745 | Canola | cytosol | 54.62 | 49.62 |
| TraesCS7A01G450400.1 | Wheat | cytosol | 52.1 | 49.6 |
| KRH26016 | Soybean | cytosol | 45.38 | 48.65 |
| TraesCS7B01G350200.1 | Wheat | cytosol | 52.1 | 48.06 |
| EER88832 | Sorghum | cytosol | 52.1 | 47.69 |
| Os06t0683400-02 | Rice | cytosol | 49.58 | 47.2 |
| Zm00001d014491_P001 | Maize | cytosol | 52.1 | 46.97 |
| TraesCS7D01G439800.1 | Wheat | cytosol | 52.1 | 46.27 |
| KRH27151 | Soybean | cytosol | 46.22 | 45.08 |
| KRH06431 | Soybean | cytosol | 47.06 | 44.8 |
| HORVU3Hr1G077070.1 | Barley | cytosol | 49.58 | 44.7 |
| KRH22173 | Soybean | cytosol | 46.22 | 44.35 |
| KRH47865 | Soybean | cytosol | 45.38 | 43.2 |
| KRG97213 | Soybean | cytosol | 45.38 | 42.86 |
| KRH68937 | Soybean | cytosol | 44.54 | 42.06 |
| HORVU7Hr1G101740.2 | Barley | cytosol, plastid | 37.82 | 27.95 |
| CDX89262 | Canola | cytosol, peroxisome, plastid | 57.14 | 25.0 |
| Bra026364.1-P | Field mustard | cytosol | 56.3 | 22.95 |
Protein Annotations
| Gene3D:1.10.238.10 | EntrezGene:100775872 | MapMan:35.1 | EMBL:ACUP02004010 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS |
| InterPro:EF_hand_dom | EnsemblPlantsGene:GLYMA_06G258000 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | UniProt:I1KE75 |
| InterPro:IPR002048 | EnsemblPlants:KRH55477 | ProteinID:KRH55477 | ProteinID:KRH55477.1 | PFAM:PF13833 | ScanProsite:PS00018 |
| PFscan:PS50222 | PANTHER:PTHR23050 | PANTHER:PTHR23050:SF170 | SUPFAM:SSF47473 | UniParc:UPI0002339E91 | SEG:seg |
Description
hypothetical protein
Coordinates
chr6:+:44214344..44215433
Molecular Weight (calculated)
13538.3 Da
IEP (calculated)
4.234
GRAVY (calculated)
-0.350
Length
119 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPSKNSQQP QHFHDYLPMM ANKLGGDGLI DELCNGFNLL KDSHREVITF ESLKRNAALL GLQGLGDEDL RLMLRQGDFD GDGVLSQLEF CVLMFRLSPE
101: LMEGSKLWLE EVLQQDLEQ
101: LMEGSKLWLE EVLQQDLEQ
001: MASPKSPTRP TQQNPQPNFH DFLPTMAGNL GGEGLIGELC NGFELLMDRE KGVITFESLR RNAAAVLGLG DLTDEDVRCM IKEGDFDCDG ALNQMEFCVL
101: MFRLSPDLME ASRCLVTEVI EEEFGFTRRH
101: MFRLSPDLME ASRCLVTEVI EEEFGFTRRH
Arabidopsis Description
KRP1Calcium-binding protein KRP1 [Source:UniProtKB/Swiss-Prot;Acc:O81831]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.