Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022723.1-P | Field mustard | cytosol | 98.47 | 98.47 |
| CDY48640 | Canola | cytosol | 93.89 | 93.89 |
| CDY42456 | Canola | cytosol | 88.55 | 88.55 |
| CDY61745 | Canola | cytosol | 87.79 | 87.79 |
| AT5G54490.1 | Thale cress | cytosol | 81.68 | 84.25 |
| CDY29293 | Canola | cytosol | 80.92 | 83.46 |
| PGSC0003DMT400064403 | Potato | cytosol | 60.31 | 67.52 |
| PGSC0003DMT400064404 | Potato | cytosol | 60.31 | 64.75 |
| Solyc10g006700.1.1 | Tomato | cytosol | 59.54 | 63.93 |
| KRH22182 | Soybean | cytosol | 55.73 | 62.93 |
| KRH27149 | Soybean | cytosol | 54.96 | 62.61 |
| KRH25972 | Soybean | cytosol | 55.73 | 61.34 |
| Solyc10g006660.2.1 | Tomato | cytosol | 60.31 | 61.24 |
| KRH55477 | Soybean | cytosol | 53.44 | 58.82 |
| TraesCS3A01G315400.1 | Wheat | cytosol | 49.62 | 58.56 |
| GSMUA_Achr3P23000_001 | Banana | cytosol | 47.33 | 58.49 |
| TraesCS3B01G351500.1 | Wheat | cytosol | 48.85 | 57.66 |
| GSMUA_Achr7P27110_001 | Banana | cytosol | 50.38 | 56.9 |
| KXG33526 | Sorghum | cytosol | 44.27 | 56.86 |
| Os01t0783700-01 | Rice | cytosol | 48.09 | 56.76 |
| Zm00001d031419_P001 | Maize | cytosol | 47.33 | 56.36 |
| Zm00001d043258_P001 | Maize | cytosol | 39.69 | 55.91 |
| TraesCS3D01G316100.1 | Wheat | cytosol | 47.33 | 55.86 |
| GSMUA_Achr9P30020_001 | Banana | cytosol | 48.09 | 55.75 |
| GSMUA_Achr8P01460_001 | Banana | cytosol | 47.33 | 55.36 |
| KXG25648 | Sorghum | cytosol | 45.8 | 54.55 |
| Os06t0683400-02 | Rice | cytosol | 49.62 | 52.0 |
| TraesCS7A01G450400.1 | Wheat | cytosol | 49.62 | 52.0 |
| GSMUA_Achr5P26360_001 | Banana | cytosol | 46.56 | 51.69 |
| TraesCS7B01G350200.1 | Wheat | cytosol | 49.62 | 50.39 |
| VIT_19s0014g04650.t01 | Wine grape | cytosol | 56.49 | 49.33 |
| TraesCS7D01G439800.1 | Wheat | cytosol | 49.62 | 48.51 |
| CDX80031 | Canola | cytosol | 39.69 | 47.71 |
| EER88832 | Sorghum | cytosol | 47.33 | 47.69 |
| HORVU3Hr1G077070.1 | Barley | cytosol | 47.33 | 46.97 |
| Zm00001d014491_P001 | Maize | cytosol | 46.56 | 46.21 |
| CDX95707 | Canola | cytosol | 45.8 | 44.78 |
| CDX83356 | Canola | cytosol | 45.8 | 44.78 |
| CDY61726 | Canola | cytosol | 44.27 | 43.61 |
| CDY27313 | Canola | cytosol | 44.27 | 43.61 |
| CDY13397 | Canola | cytosol | 43.51 | 42.86 |
| CDX89262 | Canola | cytosol, peroxisome, plastid | 81.68 | 39.34 |
| CDY41540 | Canola | cytosol | 38.17 | 34.25 |
| HORVU7Hr1G101740.2 | Barley | cytosol, plastid | 38.17 | 31.06 |
Protein Annotations
| EnsemblPlants:CDY28767 | EnsemblPlantsGene:GSBRNA2T00041412001 | Gene3D:1.10.238.10 | GO:A0A078GUK6 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR44180 |
| PANTHER:PTHR44180:SF1 | PFAM:PF13833 | PFscan:PS50222 | ProteinID:CDY28767 | ProteinID:CDY28767.1 | ScanProsite:PS00018 |
| SUPFAM:SSF47473 | UniParc:UPI0004EE9603 | UniProt:A0A078GUK6 | MapMan:35.1 | : | : |
Description
BnaA02g09590DBnaA02g09590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GUK6]
Coordinates
chrLK032226:-:153805..154394
Molecular Weight (calculated)
14785.6 Da
IEP (calculated)
4.331
GRAVY (calculated)
-0.398
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPKSSTRP TQQNQDPTFH DFFPAMAGKL GGEGLIDELC KGFQLLMDRD RGVITFESLR RNASAVLGLG DLTDEDVRCM IDEGDFDRDG ALNQMEFCVL
101: MFRLSPDLME ASRCVVTEAI EEEFCDRTHR R
101: MFRLSPDLME ASRCVVTEAI EEEFCDRTHR R
001: MASPKSSTRP NQENQEPQFQ DFFPTMAGKL GGEGLIEEIC KGFELLMDKD KGVITFESLR RNASTVLGLG DLTDDDVRYM INEGDFDRDG ALNQMEFCVL
101: MFRLSPELME ASRCVVTEVI EEEFYRH
101: MFRLSPELME ASRCVVTEVI EEEFYRH
Arabidopsis Description
PBP1PBP1 [Source:UniProtKB/TrEMBL;Acc:A0A178URF6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.