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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:plastid
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX70218
CDX82059
CDX84294
CDX88606
CDX96484
CDY11886
CDY17273
CDY20694
CDY28767
CDY38263
CDY42456
CDY43662
CDY44862
CDY47745
CDY48640
CDY53978
CDY61745
CDY69709
CDY72296

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G34650.1 CDX82059 AT1G73590.1 17889649
AT2G34650.1 CDX96484 AT1G73590.1 17889649
AT2G34650.1 CDY47745 AT1G73590.1 17889649
AT2G34650.1 CDY72296 AT1G73590.1 17889649
AT2G34650.1 CDX84294 AT2G34650.1 12857841
AT2G34650.1 CDY17273 AT2G34650.1 12857841
AT2G34650.1 CDY43662 AT2G34650.1 12857841
AT2G34650.1 CDX70218 AT5G04510.1 16601102
AT2G34650.1 CDY44862 AT5G04510.1 16601102
AT2G34650.1 CDY28767 AT5G54490.1 12857841
AT2G34650.1 CDY42456 AT5G54490.1 12857841
AT2G34650.1 CDY48640 AT5G54490.1 12857841
AT2G34650.1 CDY61745 AT5G54490.1 12857841
AT2G34650.1 CDX88606 AT5G57090.1 17889649
AT2G34650.1 CDY11886 AT5G57090.1 17889649
AT2G34650.1 CDY20694 AT5G57090.1 17889649
AT2G34650.1 CDY38263 AT5G57090.1 17889649
AT2G34650.1 CDY53978 AT5G57090.1 17889649
AT2G34650.1 CDY69709 AT5G57090.1 17889649
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra005403.1-P Field mustard cytosol 98.63 98.63
CDX84294 Canola cytosol, plastid 98.41 98.41
CDY43662 Canola cytosol 92.71 92.71
AT2G34650.1 Thale cress cytosol 92.26 92.47
KRH21098 Soybean cytosol, plastid 68.11 66.15
KRH59216 Soybean cytosol 68.34 65.22
VIT_10s0003g04320.t01 Wine grape cytosol, plastid 66.97 65.19
GSMUA_Achr7P01120_001 Banana nucleus 53.99 56.03
TraesCS5B01G377300.1 Wheat plastid 51.03 52.21
Os12t0614600-01 Rice cytosol 54.44 49.38
TraesCS5D01G044800.1 Wheat plasma membrane 53.76 49.37
TraesCS5A01G375200.1 Wheat plastid 51.48 49.34
TraesCS5A01G037100.1 Wheat cytosol, mitochondrion, nucleus, plasma membrane 53.3 49.06
Zm00001d033234_P001 Maize plastid 52.16 48.62
TraesCS5B01G037900.1 Wheat cytosol, mitochondrion, nucleus, plasma membrane 52.85 48.54
HORVU5Hr1G009390.1 Barley cytosol, nucleus, plasma membrane 53.08 48.24
Os03t0642300-00 Rice plastid 50.57 48.16
EER93759 Sorghum plastid 52.16 47.91
OQU79615 Sorghum cytosol, plastid 54.67 47.52
GSMUA_Achr5P02480_001 Banana nucleus 50.11 47.21
Zm00001d031068_P001 Maize plastid 52.39 46.84
HORVU5Hr1G093040.2 Barley plastid 51.25 42.69
CDY20744 Canola cytosol, plastid 45.79 41.7
CDY11972 Canola cytosol, plastid 46.47 41.46
CDY48186 Canola cytosol 46.01 41.39
CDY06552 Canola cytosol, plastid 45.56 41.32
CDY36769 Canola cytosol, plastid 46.01 41.06
CDY17366 Canola cytosol, plastid 46.24 40.6
CDY28629 Canola cytosol, plastid 46.01 40.4
CDY08710 Canola cytosol, plastid 40.32 40.14
CDX74407 Canola cytosol, plastid 42.14 38.7
CDX89320 Canola cytosol 44.87 38.4
CDX94306 Canola cytosol 44.87 38.4
CDY33329 Canola cytosol 41.23 37.17
CDY30287 Canola cytosol, plastid 42.14 36.85
CDY17708 Canola cytosol 46.01 36.46
CDY35093 Canola cytosol 41.91 36.08
CDX98447 Canola nucleus 38.72 35.87
CDX77795 Canola cytosol 46.24 35.55
CDX97569 Canola nucleus 38.72 35.49
CDX74691 Canola cytosol 44.87 35.37
CDX83710 Canola cytosol, plastid 43.96 35.15
CDY30659 Canola nucleus 39.18 35.03
CDY67737 Canola nucleus 39.18 34.96
CDY56474 Canola cytosol 44.87 34.44
CDY08414 Canola cytosol, plastid 43.74 33.63
CDY42166 Canola cytosol, plastid 43.51 33.57
CDY13725 Canola plastid 43.51 33.16
CDY50542 Canola cytosol 42.82 32.87
CDY30488 Canola cytosol 45.56 32.36
CDY23458 Canola cytosol 45.1 30.65
CDY13336 Canola cytosol, plastid 43.74 27.59
CDX75049 Canola cytosol 40.77 24.76
CDX67542 Canola cytosol 44.19 24.16
CDX77055 Canola cytosol 46.47 23.75
CDX84133 Canola cytosol 40.55 23.15
CDX70297 Canola cytosol 44.65 22.35
CDX76251 Canola cytosol 41.46 22.11
CDY10368 Canola cytosol 44.65 21.68
CDX73596 Canola cytosol 44.19 19.3
CDX78131 Canola cytosol 44.19 19.21
CDY33330 Canola cytosol, mitochondrion, nucleus 6.83 18.4
Protein Annotations
Gene3D:1.10.510.10MapMan:11.2.4.1.2MapMan:18.4.6.5Gene3D:3.30.200.20GO:A0A078FY35UniProt:A0A078FY35
EnsemblPlants:CDY17273ProteinID:CDY17273ProteinID:CDY17273.1ncoils:CoilGO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00095356001InterPro:IPR000719InterPro:Kinase-like_dom_sfPFAM:PF00069ScanProsite:PS00108PFscan:PS50011
PANTHER:PTHR24351PANTHER:PTHR24351:SF60InterPro:Prot_kinase_domSMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_AS
UniParc:UPI0004EF4192SEG:seg::::
Description
BnaA05g09150DBnaA05g09150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FY35]
Coordinates
chrLK032071:-:752140..753760
Molecular Weight (calculated)
49435.3 Da
IEP (calculated)
9.757
GRAVY (calculated)
-0.315
Length
439 amino acids
Sequence
(BLAST)
001: MLRESDGEMS LETTNSPISS GTESCSSFSR LSFDTPPSTT ATIPEEESFL SLKPHRSSDF AYAEIRRRRK HGLTFRDFRL MRRIGAGDIG TVYLCRLAGD
101: EEESRRSYFA MKVVDKEALA LKKKMHRAEM EKKILKMLDH PFLPTLYAEF EASHFSCIVM EYCSGGDLHS LRHRQPDGRF SLSSARFYAA EVLVALEYLH
201: MLGIIYRDLK PENILVRSDG HIMLSDFDLS LCSDSIAAVE SSSSSPENQP RSSPRRLTRL AKLFHRVLRS KKVQTLEPNR LFVAEPVTAR SGSFVGTHEY
301: VAPEVASGGS HGNAVDWWAF GVFLYEIIYG RTPFAAPTND VILRNIVKRQ LTFPTDTPAT MLELHARSLI SGLLNKDQTK RLGSRRGAAE VKVHPFFKGL
401: NFALIRTLTP PEIPSDVRRP KKAVTFSGRS NKPAAFDFF
Best Arabidopsis Sequence Match ( AT2G34650.1 )
(BLAST)
001: MLRESDGEMS LGTTNSPISS GTESCSSFSR LSFDAPPSTI PEEESFLSLK PHRSSDFAYA EIRRRKKQGL TFRDFRLMRR IGAGDIGTVY LCRLAGDEEE
101: SRSSYFAMKV VDKEALALKK KMHRAEMEKT ILKMLDHPFL PTLYAEFEAS HFSCIVMEYC SGGDLHSLRH RQPHRRFSLS SARFYAAEVL VALEYLHMLG
201: IIYRDLKPEN ILVRSDGHIM LSDFDLSLCS DSIAAVESSS SSPENQQLRS PRRFTRLARL FQRVLRSKKV QTLEPTRLFV AEPVTARSGS FVGTHEYVAP
301: EVASGGSHGN AVDWWAFGVF LYEMIYGKTP FVAPTNDVIL RNIVKRQLSF PTDSPATMFE LHARNLISGL LNKDPTKRLG SRRGAAEVKV HPFFKGLNFA
401: LIRTLTPPEI PSSVVKKPMK SATFSGRSSN KPAAFDYF
Arabidopsis Description
PIDPID [Source:UniProtKB/TrEMBL;Acc:A0A178VTE5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.