CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08414	Canola	cytosol, plastid	98.24	97.9
CDY50542	Canola	cytosol	87.52	87.06
AT3G12690.2	Thale cress	cytosol	87.52	86.31
VIT_19s0085g01140.t01	Wine grape	cytosol	57.29	73.92
PGSC0003DMT400025008	Potato	cytosol	57.12	72.22
Solyc12g017390.1.1	Tomato	cytosol	57.65	70.24
GSMUA_Achr3P16430_001	Banana	cytosol	41.12	67.44
CDY33329	Canola	cytosol	53.43	62.42
CDY35093	Canola	cytosol	53.43	59.61
TraesCS5D01G460900.1	Wheat	cytosol, mitochondrion	52.9	58.11
TraesCS5B01G459300.1	Wheat	cytosol	52.37	57.53
Os01t0233800-01	Rice	plasma membrane	53.78	57.52
HORVU5Hr1G108690.2	Barley	cytosol	51.85	57.5
Zm00001d039282_P001	Maize	cytosol	50.26	57.2
KRH13830	Soybean	cytosol	56.94	56.25
KRH43612	Soybean	cytosol	57.47	55.8
CDY06552	Canola	cytosol, plastid	47.45	55.79
EER99999	Sorghum	cytosol, plastid	52.55	55.58
CDY20744	Canola	cytosol, plastid	46.92	55.39
KRH44814	Soybean	cytosol	54.31	55.18
Zm00001d015925_P001	Maize	cytosol	50.62	55.07
CDY11972	Canola	cytosol, plastid	47.45	54.88
CDY36769	Canola	cytosol, plastid	47.28	54.67
OQU84819	Sorghum	cytosol	51.14	54.6
CDX74407	Canola	cytosol, plastid	45.69	54.39
CDY17366	Canola	cytosol, plastid	47.28	53.8
Zm00001d037782_P001	Maize	cytosol	52.02	53.62
CDY28629	Canola	cytosol, plastid	47.1	53.6
TraesCS5A01G450900.1	Wheat	plastid	52.9	52.9
TraesCS1A01G133200.1	Wheat	cytosol	51.49	52.89
HORVU1Hr1G031420.1	Barley	cytosol	51.32	52.61
CDY30287	Canola	cytosol, plastid	46.22	52.39
TraesCS1B01G152700.1	Wheat	cytosol	50.97	52.35
OQU77686	Sorghum	cytosol	51.85	52.3
Os05t0237400-01	Rice	plasma membrane	52.37	51.92
CDX89320	Canola	cytosol	46.75	51.85
CDX94306	Canola	cytosol	46.75	51.85
TraesCS3A01G157100.1	Wheat	cytosol	53.95	51.6
TraesCS3D01G164700.1	Wheat	cytosol	54.13	51.08
TraesCS3B01G183500.2	Wheat	cytosol	53.78	50.83
HORVU3Hr1G031930.2	Barley	cytosol	53.78	50.75
CDY17708	Canola	cytosol	48.33	49.64
CDX77795	Canola	cytosol	48.68	48.51
CDX83710	Canola	cytosol, plastid	45.34	46.99
TraesCS1D01G124200.2	Wheat	cytosol	51.14	46.78
CDY08710	Canola	cytosol, plastid	36.2	46.71
CDX74691	Canola	cytosol	45.17	46.14
CDY56474	Canola	cytosol	45.34	45.1
CDY13725	Canola	plastid	44.29	43.75
CDX84294	Canola	cytosol, plastid	33.74	43.74
CDY17273	Canola	cytosol	33.57	43.51
CDY43662	Canola	cytosol	33.39	43.28
CDY30488	Canola	cytosol	45.17	41.59
CDY48186	Canola	cytosol	33.74	39.34
CDY23458	Canola	cytosol	44.29	39.01
CDX98447	Canola	nucleus	30.4	36.5
CDX97569	Canola	nucleus	30.58	36.33
CDY30659	Canola	nucleus	30.4	35.23
CDY67737	Canola	nucleus	30.23	34.96
CDY13336	Canola	cytosol, plastid	41.83	34.2
CDX75049	Canola	cytosol	39.89	31.4
CDX67542	Canola	cytosol	42.71	30.26
CDX84133	Canola	cytosol	40.07	29.65
CDX70297	Canola	cytosol	42.53	27.59
CDX76251	Canola	cytosol	39.02	26.97
CDY10368	Canola	cytosol	42.53	26.77
CDY33330	Canola	cytosol, mitochondrion, nucleus	7.38	25.77
CDX73596	Canola	cytosol	42.71	24.18
CDX78131	Canola	cytosol	42.88	24.16
CDX77055	Canola	cytosol	34.09	22.58

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.6.5	Gene3D:3.30.200.20	GO:A0A078HWQ1	UniProt:A0A078HWQ1	EnsemblPlants:CDY42166
ProteinID:CDY42166	ProteinID:CDY42166.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00074355001	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351	PANTHER:PTHR24351:SF55
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EAB4AC	SEG:seg

Description

BnaC05g40530DBnaC05g40530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HWQ1]

Coordinates

chrLK032516:-:214638..217456

Molecular Weight (calculated)

62712.5 Da

IEP (calculated)

9.327

GRAVY (calculated)

-0.510

Length

569 amino acids

Sequence
(BLAST)

001: MDLASNKNTT ANSNDIDPTV KPKSPRPSNT QASSFSLKLG DNVPRNPHFD PKKMDPLVRH QPSKSPEPPS SARGTNESDS LGAKKNVLKN LYYDPKKIVP
101: LTTPETQSPS ARAHHQHKTK SPDKKRVPRQ NGDYGYGDMG PSATPFKPHT GGDVRWEAIN SVTSRGPQIG LDSFRLLKRL GYGDIGSVYL ADLQGTNAVF
201: AMKVMDKASL ASRNKLLRAQ TEREILSLLD HPFLPTLYSY FETEKFYCLV MEFCSGGNLH SLRQKQPNRR FTEEAARFYT SEVLLALEYL HMLGVVYRDL
301: KPENILVRDE GHIMLSDFDL SLRCSFNPTL VKSSSVCSTG SAILNEEFAV NGCMHPAAFL PRLLPSKKTR KAKSDSGLGG LSMPELMAEP TDVRSMSFVG
401: THEYLAPEII RGEGHGSAVD WWTFGIFLYE LLHGTTPFKG QGNRATLQNV VGKPLKFPDT PHVSSAARDL IRGLLAKDPH RRIAYTRGAT EIKQHPFFEG
501: VNWALVRSAS PPHIPDPVDL GPLTAARGKG KGYGGGDQYN SVKHDAQVAC AAGPATPTDD TAYVDFEYF

Best Arabidopsis Sequence Match ( AT3G12690.2 )
(BLAST)

001: MDLASKKNTA NVGSKEIDPI KPKSPRSSLS PFSLKLGDNV PRNPHFDPKK MDPLVKHQPP KSLEPPPSTR GTNSEGDLKH NTYSSDGDSL AMRKNAPKNL
101: HYDPKKIVPL TTSETYSPSA RNHHHHRTKS PDKKRAPRHN GDYAYGDNLV GPSAQPFKPH TGGDVRWDAI NSIASKGPQI GLDNFRLLKR LGYGDIGSVY
201: LADLRGTNAV FAMKVMDKAS LASRNKLLRA QTEREILSLL DHPFLPTLYS YFETDKFYCL VMEFCSGGNL HSLRQKQPSR RFTEEAARFY ASEVLLALEY
301: LHMLGVVYRD LKPENILVRD EGHIMLSDFD LSLRCTFNPT LVKSSSVCSG GGAILNEEFA VNGCMHPSAF LPRLLPSKKT RKAKSDSGLG GLSMPELMAE
401: PTDVRSMSFV GTHEYLAPEI IRGEGHGSAV DWWTFGIFLY ELLHGTTPFK GQGNRATLHN VVGQPLKFPD TPHVSSAARD LIRGLLVKDP HRRIAYTRGA
501: TEIKQHPFFE GVNWALVRSA APPHIPDPVD LGPYAAARGK TKSHGGGDHC NSMKPEPLVA CAAGPTDDTA YIDFEYF

Arabidopsis Description

AGC1-5Serine/threonine-protein kinase AGC1-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTW5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.