CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
vacuole 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG92082
KRH34704

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G16440.1	KRG92082	AT5G04510.1	16973627
AT1G16440.1	KRH34704	AT5G04510.1	16973627

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0085g01140.t01	Wine grape	cytosol	60.18	76.42
PGSC0003DMT400025008	Potato	cytosol	60.36	75.11
Solyc12g017390.1.1	Tomato	cytosol	60.36	72.38
Bra026056.1-P	Field mustard	cytosol	54.46	68.85
KRH13830	Soybean	cytosol	66.61	64.76
CDY33329	Canola	cytosol	55.89	64.27
KRH43612	Soybean	cytosol	67.14	64.16
CDY35093	Canola	cytosol	56.07	61.57
AT1G16440.1	Thale cress	cytosol	54.82	61.52
AT1G79250.2	Thale cress	cytosol	58.04	58.56
GSMUA_Achr2P19230_001	Banana	cytosol	48.75	58.09
Os01t0233800-01	Rice	plasma membrane	53.57	56.39
Zm00001d039282_P001	Maize	cytosol	50.18	56.2
Zm00001d037782_P001	Maize	cytosol	54.29	55.07
AT3G12690.2	Thale cress	cytosol	56.61	54.94
TraesCS1A01G133200.1	Wheat	cytosol	54.11	54.69
HORVU1Hr1G031420.1	Barley	cytosol	54.11	54.59
TraesCS1B01G152700.1	Wheat	cytosol	53.93	54.51
HORVU5Hr1G108690.2	Barley	cytosol	49.82	54.39
CDY42166	Canola	cytosol, plastid	55.18	54.31
OQU77686	Sorghum	cytosol	54.64	54.26
TraesCS5D01G460900.1	Wheat	cytosol, mitochondrion	50.18	54.25
Os05t0237400-01	Rice	plasma membrane	55.54	54.18
EER99999	Sorghum	cytosol, plastid	51.96	54.09
Bra034743.1-P	Field mustard	cytosol, plastid	55.0	53.94
CDY08414	Canola	cytosol, plastid	55.0	53.94
TraesCS5B01G459300.1	Wheat	cytosol	49.82	53.86
Bra038744.1-P	Field mustard	cytosol	55.0	53.85
CDY50542	Canola	cytosol	54.82	53.67
Zm00001d015925_P001	Maize	cytosol	48.75	52.2
TraesCS3A01G157100.1	Wheat	cytosol	54.29	51.09
OQU84819	Sorghum	cytosol	48.21	50.66
TraesCS3B01G183500.2	Wheat	cytosol	54.29	50.5
HORVU3Hr1G031930.2	Barley	cytosol	54.29	50.41
TraesCS3D01G164700.1	Wheat	cytosol	54.29	50.41
TraesCS5A01G450900.1	Wheat	plastid	50.36	49.56
Bra008404.1-P	Field mustard	nucleus	56.25	48.91
TraesCS1D01G124200.2	Wheat	cytosol	54.11	48.71
KRH36626	Soybean	cytosol	52.14	48.03
KRH11623	Soybean	cytosol	49.46	46.87
KRH34744	Soybean	cytosol	34.29	46.38
KRG92038	Soybean	cytosol	34.82	46.21
KRH26592	Soybean	nucleus	37.32	46.14
KRH25188	Soybean	nucleus, plastid	35.71	45.87
KRH30493	Soybean	cytosol, plastid	36.07	45.8
KRG93211	Soybean	cytosol	48.75	44.61
KRG94078	Soybean	cytosol, plastid	49.29	43.74
KRH07149	Soybean	cytosol	49.29	43.74
KRH22717	Soybean	nucleus	38.04	42.86
KRH56632	Soybean	plastid	37.32	42.83
KRH03726	Soybean	plastid	37.14	42.45
KRH63005	Soybean	nucleus	36.43	41.8
KRH21098	Soybean	cytosol, plastid	33.57	41.59
KRH59216	Soybean	cytosol	33.39	40.65
GSMUA_Achr5P06950_001	Banana	cytosol, mitochondrion	47.14	38.65
KRH43840	Soybean	cytosol	31.79	38.53
KRH01064	Soybean	cytosol	50.18	36.59
KRH66511	Soybean	nucleus	49.82	36.57
KRH48818	Soybean	cytosol	49.64	36.44
KRH13630	Soybean	nucleus	31.07	36.4
KRH40174	Soybean	cytosol	49.29	36.03
KRH62499	Soybean	cytosol	45.89	31.08
KRH56412	Soybean	cytosol	45.89	30.78
KRH23770	Soybean	cytosol	42.68	29.4
KRH67882	Soybean	cytosol	45.36	29.16
KRH30833	Soybean	cytosol	45.0	29.1
KRH32674	Soybean	cytosol	44.82	29.08
KRG96169	Soybean	cytosol	45.0	29.03

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.6.5	Gene3D:3.30.200.20	EMBL:ACUP02004963	InterPro:AGC-kinase_C	EnsemblPlantsGene:GLYMA_08G232800
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0019538	GO:GO:0035556	UniProt:I1KW28	InterPro:IPR000719	InterPro:IPR000961	EnsemblPlants:KRH44814
ProteinID:KRH44814	ProteinID:KRH44814.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS51285	PANTHER:PTHR24351	PANTHER:PTHR24351:SF55	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000296F320	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:19268551..19272315

Molecular Weight (calculated)

62562.5 Da

IEP (calculated)

9.635

GRAVY (calculated)

-0.467

Length

560 amino acids

Sequence
(BLAST)

001: MNYSSKKALN KDQVYANSSN NLENHVKKVK QDTNDVSTID NTTSGAGDID QVLKNNAKVT SKPTSKPYKV ENSLHISDFS TTQHPSRSAR MPSNSNPSTT
101: SSRVVAETTR EFSIITKSTN QGQRSGVSSR NDSLESTSGA HIKPHTGGDV RWDAINMVSR GNGLNLSHFK LLQRVGYGDI GSVYLVELKG SKAFFAMKVM
201: DKASLASKKK LLRSQTEREI LGLLDHPFLP TLYSYFETDK YYCLVMEFCN SGSLHSLRLK QPNKHFTEEA TRFYCSEILL ALEYLHMLGI VYRDLKPENV
301: LVRDEGHIML SDFDLSLRCS VNPTLVKSSS AHESNNGPSG SILDDEQVIH GCIQPSSFFP RILPSKKNRK LKSDFGLMVG GCLPELMAEP TNVRSMSFVG
401: THEYLAPEII RGEGHGSAVD WWTFGIFLYE LLHGITPFKG EGNKATLFNV VGQPLRFPKK PHVSNVARDL IKGLLVKEPQ KRFAYKRGAT EIKQHPFFNG
501: VNWALVRSAT PPIIPKPLDF SKYANKSNIP PIDKKIADIV ASDKSRHTQP NSSYEDFEYF

Best Arabidopsis Sequence Match ( AT1G79250.1 )
(BLAST)

001: MLTKPGKKLD SSESTHHTTS SNYPPLDIVH QTPQPRKEMQ QKPLFDPKKM DNLIKPEPAG FTNHHRPNPS PKIPSSPGSN MTESQSNLNT KPNNNNSNNN
101: SNMSSRSNSI ESTSSNPSKP HTGGDIRWDA VNTLTSKGVQ LGISDFRLLK RLGYGDIGSV YLVELRGTIT YFAMKVMDKA SLASRNKLLR AQTEREILSQ
201: LDHPFLPTLY SHFETDKFYC LVMEFCGGGN LYSLRQKQPN KCFTEDAARF FASEVLLALE YLHMLGIVYR DLKPENVLVR DDGHIMLSDF DLSLRCSVSP
301: TLVKSSSVHA AGGGSGSSRP VGLIDEDAAV QGCIQPSTFF PRILQSSKKN RKAKSDFGLF VNGSMPELMA EPTNVKSMSF VGTHEYLAPE IIRGEGHGSA
401: VDWWTFGIFI YELLYGATPF KGQGNRATLH NVIGQALRFP EVPHVSSAAR DLIKGLLVKE PQKRIAYKRG ATEIKQHPFF EGVNWALIRS ATPPHVPEPV
501: DFSCYASKDK ESMAAVDGGG KKNNNGAGGG CSTGGGDNKP NGDCNDPDYI DFEYF

Arabidopsis Description

AGC1-7Serine/threonine-protein kinase AGC1-7 [Source:UniProtKB/Swiss-Prot;Acc:Q1PFB9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.