Factsheet for Solyc12g017390.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
vacuole 1
cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc03g071750.2.1
Solyc11g007760.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G16440.1	Solyc03g071750.2.1	AT5G04510.1	16973627
AT1G16440.1	Solyc11g007760.1.1	AT5G04510.1	16973627

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400025008	Potato	cytosol	94.86	98.44
VIT_19s0085g01140.t01	Wine grape	cytosol	78.8	83.45
Bra026056.1-P	Field mustard	cytosol	70.24	74.04
CDY33329	Canola	cytosol	70.24	67.35
AT1G16440.1	Thale cress	cytosol	70.02	65.53
CDY35093	Canola	cytosol	70.45	64.51
AT1G79250.2	Thale cress	cytosol	75.16	63.24
GSMUA_Achr2P19230_001	Banana	cytosol	61.67	61.28
KRH13830	Soybean	cytosol	74.95	60.76
Zm00001d039282_P001	Maize	cytosol	64.67	60.4
KRH44814	Soybean	cytosol	72.38	60.36
Os01t0233800-01	Rice	plasma membrane	68.52	60.15
KRH43612	Soybean	cytosol	74.73	59.56
HORVU5Hr1G108690.2	Barley	cytosol	64.45	58.67
TraesCS5D01G460900.1	Wheat	cytosol, mitochondrion	64.45	58.11
AT3G12690.2	Thale cress	cytosol	71.52	57.89
EER99999	Sorghum	cytosol, plastid	66.6	57.81
TraesCS5B01G459300.1	Wheat	cytosol	64.03	57.72
CDY42166	Canola	cytosol, plastid	70.24	57.65
CDY08414	Canola	cytosol, plastid	70.24	57.44
Bra034743.1-P	Field mustard	cytosol, plastid	70.24	57.44
Zm00001d037782_P001	Maize	cytosol	67.88	57.43
Bra038744.1-P	Field mustard	cytosol	69.59	56.82
CDY50542	Canola	cytosol	69.38	56.64
HORVU1Hr1G031420.1	Barley	cytosol	67.24	56.58
TraesCS1B01G152700.1	Wheat	cytosol	66.6	56.14
TraesCS1A01G133200.1	Wheat	cytosol	66.6	56.14
OQU77686	Sorghum	cytosol	67.67	56.03
Os05t0237400-01	Rice	plasma membrane	68.52	55.75
Zm00001d015925_P001	Maize	cytosol	62.31	55.64
Solyc02g087510.2.1	Tomato	cytosol	59.96	53.85
OQU84819	Sorghum	cytosol	61.24	53.66
TraesCS5A01G450900.1	Wheat	plastid	65.31	53.6
TraesCS3A01G157100.1	Wheat	cytosol	67.24	52.77
TraesCS3B01G183500.2	Wheat	cytosol	67.45	52.33
TraesCS3D01G164700.1	Wheat	cytosol	67.45	52.24
HORVU3Hr1G031930.2	Barley	cytosol	67.24	52.07
Bra008404.1-P	Field mustard	nucleus	69.81	50.62
TraesCS1D01G124200.2	Wheat	cytosol	66.81	50.16
Solyc07g065710.2.1	Tomato	plastid	63.17	48.84
Solyc04g015130.2.1	Tomato	cytosol, plastid	63.38	48.76
Solyc10g005770.2.1	Tomato	plastid	62.74	47.8
Solyc12g006690.1.1	Tomato	nucleus, plastid	45.82	46.32
Solyc02g093360.2.1	Tomato	cytosol	61.24	45.76
Solyc11g067080.1.1	Tomato	nucleus	45.18	45.67
Solyc02g067830.2.1	Tomato	cytosol	59.96	44.66
Solyc11g007250.1.1	Tomato	nucleus	43.68	44.44
GSMUA_Achr5P06950_001	Banana	cytosol, mitochondrion	58.24	39.82
Solyc01g090240.2.1	Tomato	cytosol	59.31	39.57
Solyc10g038190.1.1	Tomato	cytosol	55.25	37.02
Solyc07g056400.1.1	Tomato	nucleus	37.69	36.44
Solyc11g067070.1.1	Tomato	cytosol	53.1	29.67
Solyc06g074480.2.1	Tomato	cytosol	53.32	29.12
Solyc10g083500.1.1	Tomato	nucleus	54.39	25.27
Solyc09g009380.2.1	Tomato	cytosol	54.18	24.8

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.6.5	Gene3D:3.30.200.20	ProteinID:AAF66637.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005886	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351	PANTHER:PTHR24351:SF55
InterPro:Prot_kinase_dom	UniProt:Q9M728	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc12g017390.1
EnsemblPlants:Solyc12g017390.1.1	UniParc:UPI000009D836	SEG:seg	:	:	:

Description

Serine/threonine-protein kinase AGC1-5 [Source:Projected from Arabidopsis thaliana (AT3G12690) UniProtKB/Swiss-Prot;Acc:Q9LTW5]

Coordinates

chr12:+:6640415..6642426

Molecular Weight (calculated)

51667.4 Da

IEP (calculated)

7.233

GRAVY (calculated)

-0.347

Length

467 amino acids

Sequence
(BLAST)

001: MSTKPTPLEL SEMSTMSLDE TFHPNKVSES TESSSSSTTP LKPHTGGDIR WDAINSATGR GGPPLNLSNF RLLKRLGYGD IGSVYLVELR GTNAFFAMKV
101: MDKGSLASRN KLLRAQTERE ILSLLDHPFL PTLYSHFETD KFYCLVMEFC SGGNLHTLRQ KQPNKHFTEE ASRFYASEVL LALEYLHMLG IVYRDLKPEN
201: VLVRDEGHIM LSDFDLSLRC SVNPTLVKSS SVHGGGGGGN PSSGSGILDN DNAVQGCIQP STFFPRNILP TKKNRKSKSD FGLFVGGSLP ELMAEPTNVR
301: SMSFVGTHEY LAPEIIRGEG HGSAVDWWTF GIFLYELLHG TTPFKGAGNR ATLFNVVGQP LRFPETPQVS AIARDLIRGL LVKEPHKRIA YKRGATEIKQ
401: HPFFEGVNWA LVRSAVPPSI PEPVDFAQYA SKDASAPCSD KKMPDTESHD KSKNTCTDSS YIDFEYF

Best Arabidopsis Sequence Match ( AT1G79250.1 )
(BLAST)

001: MLTKPGKKLD SSESTHHTTS SNYPPLDIVH QTPQPRKEMQ QKPLFDPKKM DNLIKPEPAG FTNHHRPNPS PKIPSSPGSN MTESQSNLNT KPNNNNSNNN
101: SNMSSRSNSI ESTSSNPSKP HTGGDIRWDA VNTLTSKGVQ LGISDFRLLK RLGYGDIGSV YLVELRGTIT YFAMKVMDKA SLASRNKLLR AQTEREILSQ
201: LDHPFLPTLY SHFETDKFYC LVMEFCGGGN LYSLRQKQPN KCFTEDAARF FASEVLLALE YLHMLGIVYR DLKPENVLVR DDGHIMLSDF DLSLRCSVSP
301: TLVKSSSVHA AGGGSGSSRP VGLIDEDAAV QGCIQPSTFF PRILQSSKKN RKAKSDFGLF VNGSMPELMA EPTNVKSMSF VGTHEYLAPE IIRGEGHGSA
401: VDWWTFGIFI YELLYGATPF KGQGNRATLH NVIGQALRFP EVPHVSSAAR DLIKGLLVKE PQKRIAYKRG ATEIKQHPFF EGVNWALIRS ATPPHVPEPV
501: DFSCYASKDK ESMAAVDGGG KKNNNGAGGG CSTGGGDNKP NGDCNDPDYI DFEYF

Arabidopsis Description

AGC1-7Serine/threonine-protein kinase AGC1-7 [Source:UniProtKB/Swiss-Prot;Acc:Q1PFB9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.