Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026056.1-P | Field mustard | cytosol | 76.35 | 86.0 |
| CDY33329 | Canola | cytosol | 82.36 | 84.39 |
| CDY35093 | Canola | cytosol | 83.77 | 81.96 |
| VIT_19s0085g01140.t01 | Wine grape | cytosol | 64.53 | 73.02 |
| PGSC0003DMT400025008 | Potato | cytosol | 65.13 | 72.22 |
| AT1G79250.2 | Thale cress | cytosol | 77.96 | 70.09 |
| Solyc12g017390.1.1 | Tomato | cytosol | 65.53 | 70.02 |
| KRH13830 | Soybean | cytosol | 63.53 | 55.03 |
| KRH44814 | Soybean | cytosol | 61.52 | 54.82 |
| KRH43612 | Soybean | cytosol | 64.33 | 54.78 |
| AT3G12690.2 | Thale cress | cytosol | 61.12 | 52.86 |
| AT5G55910.2 | Thale cress | cytosol, plastid | 52.51 | 52.61 |
| AT4G26610.1 | Thale cress | cytosol | 52.71 | 51.98 |
| AT5G40030.1 | Thale cress | cytosol, plastid | 51.1 | 51.1 |
| AT5G47750.1 | Thale cress | cytosol, plastid | 54.71 | 46.59 |
| AT3G44610.1 | Thale cress | cytosol, plastid | 41.48 | 45.9 |
| AT3G27580.1 | Thale cress | cytosol, plastid | 50.7 | 43.77 |
| AT2G34650.1 | Thale cress | cytosol | 36.67 | 41.78 |
| AT2G26700.1 | Thale cress | cytosol, plastid | 38.48 | 36.57 |
| AT1G53700.1 | Thale cress | cytosol | 32.87 | 34.45 |
| AT3G14370.1 | Thale cress | nucleus | 32.67 | 33.96 |
| AT2G44830.2 | Thale cress | cytosol | 51.7 | 33.73 |
| AT3G52890.4 | Thale cress | cytosol | 47.9 | 25.59 |
| AT5G03640.1 | Thale cress | nucleus | 46.49 | 25.05 |
| AT2G36350.1 | Thale cress | cytosol | 46.69 | 24.55 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.6.5 | Gene3D:3.30.200.20 | EntrezGene:838214 | ProteinID:AAD34696.1 | ProteinID:AEE29451.1 |
| ArrayExpress:AT1G16440 | EnsemblPlantsGene:AT1G16440 | RefSeq:AT1G16440 | TAIR:AT1G16440 | RefSeq:AT1G16440-TAIR-G | EnsemblPlants:AT1G16440.1 |
| TAIR:AT1G16440.1 | Unigene:At.49682 | ncoils:Coil | EMBL:DQ446257 | EMBL:DQ652840 | UniProt:F4I4F2 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0005886 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009653 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0030154 | GO:GO:0035556 |
| GO:GO:0080147 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | RefSeq:NP_173094.4 | PFAM:PF00069 | PO:PO:0000256 |
| PO:PO:0000262 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24351 | PANTHER:PTHR24351:SF55 | InterPro:Prot_kinase_dom |
| Symbol:RSH3 | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI0001A7B1AB | SEG:seg |
Description
RHS3Serine/threonine-protein kinase RHS3 [Source:UniProtKB/Swiss-Prot;Acc:F4I4F2]
Coordinates
chr1:+:5615808..5617672
Molecular Weight (calculated)
56132.7 Da
IEP (calculated)
8.737
GRAVY (calculated)
-0.542
Length
499 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLKPGNKLV SPETSHHRDS ASNSSNHKCQ QQKPRKDKQK QVEQNTKKIE EHQIKSESTL LISNHNVNMS SQSNNSESTS TNNSSKPHTG GDIRWDAVNS
101: LKSRGIKLGI SDFRVLKRLG YGDIGSVYLV ELKGANPTTY FAMKVMDKAS LVSRNKLLRA QTEREILSQL DHPFLPTLYS HFETDKFYCL VMEFCSGGNL
201: YSLRQKQPNK CFTEDAARFF ASEVLLALEY LHMLGIVYRD LKPENVLVRD DGHIMLSDFD LSLRCSVNPT LVKSFNGGGT TGIIDDNAAV QGCYQPSAFF
301: PRMLQSSKKN RKSKSDFDGS LPELMAEPTN VKSMSFVGTH EYLAPEIIKN EGHGSAVDWW TFGIFIYELL HGATPFKGQG NKATLYNVIG QPLRFPEYSQ
401: VSSTAKDLIK GLLVKEPQNR IAYKRGATEI KQHPFFEGVN WALIRGETPP HLPEPVDFSC YVKKEKESLP PAATEKKSKM FDEANKSGSD PDYIVFEYF
101: LKSRGIKLGI SDFRVLKRLG YGDIGSVYLV ELKGANPTTY FAMKVMDKAS LVSRNKLLRA QTEREILSQL DHPFLPTLYS HFETDKFYCL VMEFCSGGNL
201: YSLRQKQPNK CFTEDAARFF ASEVLLALEY LHMLGIVYRD LKPENVLVRD DGHIMLSDFD LSLRCSVNPT LVKSFNGGGT TGIIDDNAAV QGCYQPSAFF
301: PRMLQSSKKN RKSKSDFDGS LPELMAEPTN VKSMSFVGTH EYLAPEIIKN EGHGSAVDWW TFGIFIYELL HGATPFKGQG NKATLYNVIG QPLRFPEYSQ
401: VSSTAKDLIK GLLVKEPQNR IAYKRGATEI KQHPFFEGVN WALIRGETPP HLPEPVDFSC YVKKEKESLP PAATEKKSKM FDEANKSGSD PDYIVFEYF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.