Factsheet for Bra026056.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
vacuole 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra009447.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G16440.1	Bra009447.1-P	AT5G04510.1	16973627

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35093	Canola	cytosol	99.1	86.08
AT1G16440.1	Thale cress	cytosol	86.0	76.35
VIT_19s0085g01140.t01	Wine grape	cytosol	73.36	73.7
PGSC0003DMT400025008	Potato	cytosol	74.27	73.11
Solyc12g017390.1.1	Tomato	cytosol	74.04	70.24
Bra035592.1-P	Field mustard	cytosol	50.79	62.15
KRH13830	Soybean	cytosol	71.78	55.21
KRH44814	Soybean	cytosol	68.85	54.46
KRH43612	Soybean	cytosol	72.01	54.44
Bra028955.1-P	Field mustard	cytosol, plastid	58.47	52.64
Bra002868.1-P	Field mustard	cytosol, plastid	59.14	52.4
Bra005275.1-P	Field mustard	cytosol	18.96	51.85
Bra034743.1-P	Field mustard	cytosol, plastid	66.82	51.84
Bra038744.1-P	Field mustard	cytosol	66.37	51.4
Bra008404.1-P	Field mustard	nucleus	74.72	51.4
Bra026417.1-P	Field mustard	cytosol	58.47	50.49
Bra025621.1-P	Field mustard	cytosol, plastid	55.98	50.3
Bra024918.1-P	Field mustard	cytosol	60.72	48.56
Bra019427.1-P	Field mustard	cytosol, plastid	45.6	45.8
Bra025288.1-P	Field mustard	cytosol	56.88	42.86
Bra039602.1-P	Field mustard	cytosol	7.0	41.33
Bra021925.1-P	Field mustard	cytosol	40.86	41.23
Bra005403.1-P	Field mustard	cytosol	40.18	40.55
Bra040842.1-P	Field mustard	cytosol	6.77	40.0
Bra037631.1-P	Field mustard	cytosol	56.43	38.58
Bra034312.1-P	Field mustard	cytosol	44.02	36.86
Bra004872.1-P	Field mustard	cytosol	57.79	36.52
Bra027344.1-P	Field mustard	nucleus	37.47	34.66
Bra041025.1-P	Field mustard	nucleus	37.92	34.15
Bra026057.1-P	Field mustard	cytosol, nucleus, plastid	10.38	31.29
Bra019641.1-P	Field mustard	cytosol	48.08	27.03
Bra005280.1-P	Field mustard	cytosol	51.69	25.79
Bra028538.1-P	Field mustard	cytosol	51.92	25.7
Bra009522.1-P	Field mustard	cytosol	51.47	25.45
Bra006955.1-P	Field mustard	cytosol	52.14	22.13

Protein Annotations

MapMan:18.4.6.5	EnsemblPlantsGene:Bra026056	EnsemblPlants:Bra026056.1	EnsemblPlants:Bra026056.1-P	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009653	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0030154	GO:GO:0080147	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M4EB97
PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351	PANTHER:PTHR24351:SF55	InterPro:Prot_kinase_dom
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000253F198	SEG:seg	:

Description

AT1G16440 (E=2e-207) | kinase

Coordinates

chrA06:+:6310104..6311791

Molecular Weight (calculated)

49764.5 Da

IEP (calculated)

8.594

GRAVY (calculated)

-0.394

Length

443 amino acids

Sequence
(BLAST)

001: MSSRSNSMES TSSNKPHTGG DIRWDAVNYM KARGVKLGIS DFRVLKRLGY GDIGSVYLVE LKGAHKTTYF AMKVMDRASL VSRNKLLRAQ TEREILSQLD
101: HPFLPTLYSH FETDKFYCLV MEFCSGGNLY SLRQKQPNKC FTEEAARFFA SEVLLALEYL HMLGIVYRDL KPENVLVRDD GHIMLSDFDL SLRCSVNPTL
201: VKSPSVHVTS SSKTTGIIND DAAVQGCYQP STFFPRILHS SKKNRKSKSD IGEGSLPELM AEPANVKSMS FVGTHEYLAP EIIRNEGHGS AVDWWTFGIF
301: IYELLHGATP FKGQGNKATL YNVIGQPLRF PENSQVSSTA KDLIKGLLVK EPQKRIAYKR GATEIKQHPF FEGVNWALIR GQTPPHVPEP VDFSCYERKE
401: KEKEKEFLPV LAAAVADGGK EKKVCDKGTR GGSDPDYIDF EYF

Best Arabidopsis Sequence Match ( AT1G16440.1 )
(BLAST)

001: MLLKPGNKLV SPETSHHRDS ASNSSNHKCQ QQKPRKDKQK QVEQNTKKIE EHQIKSESTL LISNHNVNMS SQSNNSESTS TNNSSKPHTG GDIRWDAVNS
101: LKSRGIKLGI SDFRVLKRLG YGDIGSVYLV ELKGANPTTY FAMKVMDKAS LVSRNKLLRA QTEREILSQL DHPFLPTLYS HFETDKFYCL VMEFCSGGNL
201: YSLRQKQPNK CFTEDAARFF ASEVLLALEY LHMLGIVYRD LKPENVLVRD DGHIMLSDFD LSLRCSVNPT LVKSFNGGGT TGIIDDNAAV QGCYQPSAFF
301: PRMLQSSKKN RKSKSDFDGS LPELMAEPTN VKSMSFVGTH EYLAPEIIKN EGHGSAVDWW TFGIFIYELL HGATPFKGQG NKATLYNVIG QPLRFPEYSQ
401: VSSTAKDLIK GLLVKEPQNR IAYKRGATEI KQHPFFEGVN WALIRGETPP HLPEPVDFSC YVKKEKESLP PAATEKKSKM FDEANKSGSD PDYIVFEYF

Arabidopsis Description

RHS3Serine/threonine-protein kinase RHS3 [Source:UniProtKB/Swiss-Prot;Acc:F4I4F2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.