Factsheet for Bra026057.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
plastid 2
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33330	Canola	cytosol, mitochondrion, nucleus	98.64	88.96
Bra026056.1-P	Field mustard	cytosol	31.29	10.38
Bra035592.1-P	Field mustard	cytosol	21.77	8.84
Bra005275.1-P	Field mustard	cytosol	8.84	8.02
Bra039602.1-P	Field mustard	cytosol	4.08	8.0
Bra002868.1-P	Field mustard	cytosol, plastid	24.49	7.2
Bra028955.1-P	Field mustard	cytosol, plastid	23.81	7.11
Bra019427.1-P	Field mustard	cytosol, plastid	21.09	7.03
Bra034743.1-P	Field mustard	cytosol, plastid	27.21	7.01
Bra025288.1-P	Field mustard	cytosol	27.21	6.8
Bra040842.1-P	Field mustard	cytosol	3.4	6.67
Bra026417.1-P	Field mustard	cytosol	23.13	6.63
Bra021925.1-P	Field mustard	cytosol	19.73	6.61
Bra005403.1-P	Field mustard	cytosol	19.73	6.61
Bra008404.1-P	Field mustard	nucleus	28.57	6.52
Bra025621.1-P	Field mustard	cytosol, plastid	21.77	6.49
Bra038744.1-P	Field mustard	cytosol	25.17	6.47
Bra024918.1-P	Field mustard	cytosol	23.13	6.14
Bra027344.1-P	Field mustard	nucleus	18.37	5.64
Bra037631.1-P	Field mustard	cytosol	24.49	5.56
Bra041025.1-P	Field mustard	nucleus	17.69	5.28
Bra034312.1-P	Field mustard	cytosol	18.37	5.1
Bra004872.1-P	Field mustard	cytosol	23.81	4.99
Bra019641.1-P	Field mustard	cytosol	19.73	3.68
Bra005280.1-P	Field mustard	cytosol	21.77	3.6
Bra028538.1-P	Field mustard	cytosol	21.77	3.58
Bra009522.1-P	Field mustard	cytosol	21.09	3.46
Bra006955.1-P	Field mustard	cytosol	21.09	2.97

Protein Annotations

Gene3D:1.20.58.1600	MapMan:15.3.3.1.8	EnsemblPlantsGene:Bra026057	EnsemblPlants:Bra026057.1	EnsemblPlants:Bra026057.1-P	ncoils:Coil
GO:GO:0001104	GO:GO:0003674	GO:GO:0003712	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005654	GO:GO:0006139	GO:GO:0006357	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016592	InterPro:IPR038427	UniProt:M4EB98	InterPro:MED22_sf
InterPro:Med22	PFAM:PF06179	PANTHER:PTHR12434	UniParc:UPI000253F197	SEG:seg	:

Description

AT1G07950 (E=1e-058) | surfeit locus protein 5 family protein / SURF5 family protein

Coordinates

chrA06:+:6308529..6309331

Molecular Weight (calculated)

15875.7 Da

IEP (calculated)

4.776

GRAVY (calculated)

-0.233

Length

147 amino acids

Sequence
(BLAST)

001: MSGSGEGAGP TAAAAAAALQ KQKALLQRVE TDITSVVDNF TQIVNVARVS DLPVKNSQEA YMMEMRASKM VQAADSILKL VSELKQTAIF SGFASLNDHV
101: EQRIAEFDQE AEKTNRLLAR IGDDASASLK ELEAHYYSSA QRLSPDV

Best Arabidopsis Sequence Match ( AT1G07950.1 )
(BLAST)

001: MNKGGGSGGG SGGGSGPTAA AAAAALQKQK ALLQRVETDI TSVVDNFTQI VNVSRVSDPP VKNSQETYMM EMRASRMVQA ADSLLKLVSE LKQTAIFSGF
101: ASLNDHVEQR IEEFDQEAEK TNRLLARIAD DASANLKELE SHYYSSAQRL TLDI

Arabidopsis Description

MED22BSurfeit locus protein 5 subunit 22 of Mediator complex [Source:TAIR;Acc:AT1G07950]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.