Factsheet for VIT_19s0085g01140.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
vacuole 1
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, vacuole
BaCelLo:	nucleus
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_13s0074g00100.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G16440.1	VIT_13s0074g00100.t01	AT5G04510.1	16973627

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400025008	Potato	cytosol	83.45	81.78
Solyc12g017390.1.1	Tomato	cytosol	83.45	78.8
Bra026056.1-P	Field mustard	cytosol	73.7	73.36
CDY33329	Canola	cytosol	73.24	66.32
AT1G16440.1	Thale cress	cytosol	73.02	64.53
CDY35093	Canola	cytosol	73.47	63.53
GSMUA_Achr2P19230_001	Banana	cytosol	66.67	62.55
AT1G79250.2	Thale cress	cytosol	77.55	61.62
KRH13830	Soybean	cytosol	79.59	60.94
Zm00001d039282_P001	Maize	cytosol	68.48	60.4
KRH44814	Soybean	cytosol	76.42	60.18
Os01t0233800-01	Rice	plasma membrane	72.34	59.96
HORVU5Hr1G108690.2	Barley	cytosol	69.61	59.84
TraesCS5D01G460900.1	Wheat	cytosol, mitochondrion	70.07	59.65
KRH43612	Soybean	cytosol	78.91	59.39
TraesCS5B01G459300.1	Wheat	cytosol	69.61	59.27
EER99999	Sorghum	cytosol, plastid	70.98	58.18
AT3G12690.2	Thale cress	cytosol	75.06	57.37
CDY42166	Canola	cytosol, plastid	73.92	57.29
CDY08414	Canola	cytosol, plastid	74.15	57.27
Bra034743.1-P	Field mustard	cytosol, plastid	74.15	57.27
Bra038744.1-P	Field mustard	cytosol	73.7	56.82
Zm00001d037782_P001	Maize	cytosol	70.98	56.7
CDY50542	Canola	cytosol	73.47	56.64
HORVU1Hr1G031420.1	Barley	cytosol	70.07	55.68
OQU77686	Sorghum	cytosol	71.2	55.67
TraesCS1A01G133200.1	Wheat	cytosol	69.84	55.6
TraesCS1B01G152700.1	Wheat	cytosol	69.84	55.6
Zm00001d015925_P001	Maize	cytosol	65.53	55.26
TraesCS5A01G450900.1	Wheat	plastid	70.75	54.83
Os05t0237400-01	Rice	plasma membrane	71.2	54.7
OQU84819	Sorghum	cytosol	65.31	54.03
TraesCS3A01G157100.1	Wheat	cytosol	71.2	52.77
TraesCS3B01G183500.2	Wheat	cytosol	71.43	52.33
VIT_13s0074g00730.t01	Wine grape	cytosol	41.04	52.31
TraesCS3D01G164700.1	Wheat	cytosol	71.2	52.07
VIT_14s0066g02140.t01	Wine grape	cytosol	63.27	51.86
HORVU3Hr1G031930.2	Barley	cytosol	70.75	51.74
Bra008404.1-P	Field mustard	nucleus	73.24	50.16
TraesCS1D01G124200.2	Wheat	cytosol	69.84	49.52
VIT_19s0015g00770.t01	Wine grape	extracellular	67.12	48.45
VIT_10s0116g00440.t01	Wine grape	plastid	67.12	47.74
VIT_06s0061g01560.t01	Wine grape	nucleus	48.3	47.33
VIT_11s0016g04910.t01	Wine grape	nucleus, plastid	48.53	45.53
VIT_10s0003g04320.t01	Wine grape	cytosol, plastid	44.44	43.46
VIT_14s0066g00460.t01	Wine grape	cytosol, plastid	64.17	41.74
GSMUA_Achr5P06950_001	Banana	cytosol, mitochondrion	63.72	41.14
VIT_15s0021g01540.t01	Wine grape	cytosol	66.21	41.01
VIT_19s0027g00020.t01	Wine grape	nucleus, plastid	41.04	38.19
VIT_06s0061g01540.t01	Wine grape	cytosol	58.28	29.24
VIT_08s0007g03600.t01	Wine grape	cytosol	57.14	29.17

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100241619	wikigene:100241619	MapMan:18.4.6.5	Gene3D:3.30.200.20	ProteinID:CCB48962
ProteinID:CCB48962.1	UniProt:F6H9R9	EMBL:FN595503	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
EntrezGene:LOC100241619	wikigene:LOC100241619	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351
PANTHER:PTHR24351:SF55	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002108A1A
ArrayExpress:VIT_19s0085g01140	EnsemblPlantsGene:VIT_19s0085g01140	EnsemblPlants:VIT_19s0085g01140.t01	RefSeq:XP_002265801	RefSeq:XP_002265801.2	SEG:seg

Description

No Description!

Coordinates

chr19:+:23829724..23831847

Molecular Weight (calculated)

48909.3 Da

IEP (calculated)

7.763

GRAVY (calculated)

-0.307

Length

441 amino acids

Sequence
(BLAST)

001: MSTSTRSDSL ESSTTPLRPH TGGDIRWDAI NLANSRDSPL GLSHFRLLKR LGYGDIGSVY LVELRGTTAY FAMKVMDKAS LASRNKLLRA QTEKEILGLL
101: DHPFLPTLYS YFETDKFYCL VMEFCSGGNL HSLRQKQPNK HFSEEAARFY ASEVLLALEY LHMLGIVYRD LKPENVLVRD EGHIMLSDFD LSLRCSVSPT
201: LVKSSSGHSG STVGGGGGGI SSGAILDDEY AVQGCIQPST FLPRILPTKK NRKSKSDFGL FVGGSLPELM AEPTNVRSMS FVGTHEYLAP EIIRGEGHGS
301: AVDWWTFGIF LYELLHGTTP FKGQGNRATL FNVVGQPLRF PDTPTVSFMA RDLIRGLLVK EPQKRIAYKR GATEIKQHPF FEGVNWALVR SAMPPHIPEP
401: VDFGHFASKE SGHAEKKNSD TGGDKHKNSP NDASYVDFEY F

Best Arabidopsis Sequence Match ( AT1G79250.1 )
(BLAST)

001: MLTKPGKKLD SSESTHHTTS SNYPPLDIVH QTPQPRKEMQ QKPLFDPKKM DNLIKPEPAG FTNHHRPNPS PKIPSSPGSN MTESQSNLNT KPNNNNSNNN
101: SNMSSRSNSI ESTSSNPSKP HTGGDIRWDA VNTLTSKGVQ LGISDFRLLK RLGYGDIGSV YLVELRGTIT YFAMKVMDKA SLASRNKLLR AQTEREILSQ
201: LDHPFLPTLY SHFETDKFYC LVMEFCGGGN LYSLRQKQPN KCFTEDAARF FASEVLLALE YLHMLGIVYR DLKPENVLVR DDGHIMLSDF DLSLRCSVSP
301: TLVKSSSVHA AGGGSGSSRP VGLIDEDAAV QGCIQPSTFF PRILQSSKKN RKAKSDFGLF VNGSMPELMA EPTNVKSMSF VGTHEYLAPE IIRGEGHGSA
401: VDWWTFGIFI YELLYGATPF KGQGNRATLH NVIGQALRFP EVPHVSSAAR DLIKGLLVKE PQKRIAYKRG ATEIKQHPFF EGVNWALIRS ATPPHVPEPV
501: DFSCYASKDK ESMAAVDGGG KKNNNGAGGG CSTGGGDNKP NGDCNDPDYI DFEYF

Arabidopsis Description

AGC1-7Serine/threonine-protein kinase AGC1-7 [Source:UniProtKB/Swiss-Prot;Acc:Q1PFB9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.