Factsheet for VIT_08s0007g03600.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
vacuole 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_13s0074g00100.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G36350.1	VIT_13s0074g00100.t01	AT5G04510.1	16973627

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005275.1-P	Field mustard	cytosol	13.43	71.6
Os12t0480200-01	Rice	cytosol	34.26	68.84
KRH32674	Soybean	cytosol	63.31	63.38
KRH30833	Soybean	cytosol	62.73	62.59
KRH67882	Soybean	cytosol	60.76	60.28
KRG96169	Soybean	cytosol	60.19	59.91
Bra039602.1-P	Field mustard	cytosol	5.09	58.67
CDY13336	Canola	cytosol, plastid	46.99	58.33
VIT_06s0061g01540.t01	Wine grape	cytosol	58.8	57.79
VIT_19s0085g01140.t01	Wine grape	cytosol	29.17	57.14
GSMUA_Achr10P...	Banana	cytosol	45.25	56.5
CDX75049	Canola	cytosol	46.41	55.46
CDX84133	Canola	cytosol	48.73	54.75
Bra040842.1-P	Field mustard	cytosol	4.75	54.67
GSMUA_Achr6P13320_001	Banana	cytosol	44.91	53.44
GSMUA_Achr11P...	Banana	cytosol	44.21	53.28
GSMUA_Achr8P16090_001	Banana	nucleus	46.53	53.24
CDX67542	Canola	cytosol	49.42	53.18
VIT_13s0074g00730.t01	Wine grape	cytosol	21.06	52.6
HORVU2Hr1G072580.1	Barley	cytosol	46.99	51.85
TraesCS2B01G309900.1	Wheat	cytosol	46.88	51.79
EES17014	Sorghum	cytosol	47.22	51.65
TraesCS2D01G291200.1	Wheat	cytosol	46.53	51.41
TraesCS2A01G292800.1	Wheat	cytosol	46.41	51.21
Zm00001d041063_P001	Maize	cytosol	46.76	51.14
VIT_14s0066g02140.t01	Wine grape	cytosol	31.71	50.93
Bra019641.1-P	Field mustard	cytosol	46.3	50.76
Bra005280.1-P	Field mustard	cytosol	51.85	50.45
TraesCS5A01G107300.1	Wheat	cytosol	45.83	50.45
TraesCS5B01G115200.1	Wheat	cytosol	45.6	50.19
Bra028538.1-P	Field mustard	cytosol	51.74	49.94
Zm00001d003812_P002	Maize	cytosol	46.18	49.94
TraesCS5D01G122400.1	Wheat	cytosol	45.37	49.94
HORVU5Hr1G035610.2	Barley	cytosol	45.37	49.87
Zm00001d025342_P003	Maize	cytosol	46.3	49.81
VIT_19s0015g00770.t01	Wine grape	extracellular	35.19	49.75
CDX76251	Canola	cytosol	47.34	49.7
OQU81510	Sorghum	cytosol	46.41	49.57
AT3G52890.4	Thale cress	cytosol	53.47	49.46
AT2G36350.1	Thale cress	cytosol	54.28	49.42
PGSC0003DMT400072395	Potato	nucleus	57.18	49.15
Solyc10g083500.1.1	Tomato	nucleus	56.94	48.96
CDX70297	Canola	cytosol	49.31	48.57
Solyc09g009380.2.1	Tomato	cytosol	57.29	48.53
PGSC0003DMT400006862	Potato	cytosol	57.18	48.43
VIT_10s0116g00440.t01	Wine grape	plastid	34.72	48.39
AT5G03640.1	Thale cress	nucleus	51.74	48.27
Bra009522.1-P	Field mustard	cytosol	50.0	48.21
VIT_06s0061g01560.t01	Wine grape	nucleus	25.0	48.0
CDY10368	Canola	cytosol	50.0	47.79
VIT_11s0016g04910.t01	Wine grape	nucleus, plastid	25.23	46.38
VIT_10s0003g04320.t01	Wine grape	cytosol, plastid	23.26	44.57
CDX73596	Canola	cytosol	50.93	43.78
CDX78131	Canola	cytosol	51.04	43.66
VIT_14s0066g00460.t01	Wine grape	cytosol, plastid	34.26	43.66
VIT_15s0021g01540.t01	Wine grape	cytosol	35.42	42.98
Os04t0410200-00	Rice	cytosol	24.77	42.54
Bra006955.1-P	Field mustard	cytosol	51.39	42.53
VIT_19s0027g00020.t01	Wine grape	nucleus, plastid	22.8	41.56

Protein Annotations

EntrezGene:100246067	wikigene:100246067	MapMan:18.4.6.5	EMBL:AM476497	ProteinID:CAN68473	ProteinID:CAN68473.1
ProteinID:CCB55416	ProteinID:CCB55416.1	UniProt:F6HKJ4	EMBL:FN595991	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005886	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	EntrezGene:LOC100246067	wikigene:LOC100246067	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24351	PANTHER:PTHR24351:SF92	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
TIGR:TC71073	UniParc:UPI0001983DD3	ArrayExpress:VIT_08s0007g03600	EnsemblPlantsGene:VIT_08s0007g03600	EnsemblPlants:VIT_08s0007g03600.t01	unigene:Vvi.17664
RefSeq:XP_002277025	RefSeq:XP_002277025.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr8:-:17534696..17540554

Molecular Weight (calculated)

94526.8 Da

IEP (calculated)

9.357

GRAVY (calculated)

-0.424

Length

864 amino acids

Sequence
(BLAST)

001: MGSFPGSCEI VESSEDPSLA QLSRGIHRPK SGVKVDDKVR KPPILKLGHD SSLEDDLNRI FEAINLKNAS KVWGLPHQVG TDSPSKNALK KPITVSGSHS
101: PRIGISEPAT LKQALRGLCI SQASEMAAVK RLSKSGSYSG ASEAGRIKSL FSTVVVEARQ PGMSLGKGGI AEISLFPEES TSNASEKVTQ YLHVPKVKSS
201: SQSAHSSPRF AVGATQLGTT ARSPQSEIVP VSTEISNQTS KTVQKEKHTS VTALSGANTD DNMLELGTTG HASTKSANRA SALKPGRKGR LQNVPSSSVN
301: SSKASKSTKN TQRVVKPILR NKNFVKKKVK QDSNSATSTS NTCSEVNDEM DPSTSQLVCQ RCHCALKDAR KELSQDSPTS NLKSLSTEAS FSNMNSVANK
401: PGISSNSYNR HKAIFVKANK NAKSREKGEL SQSSKSSRGE YSSSTSISEE SILSGSSCGN RPHMSKDLRW EAIRQVQMQQ GVLGLRHFNL LKKLGGGDIG
501: TVYLAELIGT CCLFAIKVMD NDFLARRKKM PRAQTEREIL RMLDHPFLPT LYAQFTSDNL SCLVMEYCPG GDLHVLRQKQ PGRNFPEQAA RFYVAEVLLA
601: LEYLHMLGVV YRDLKPENIL VREDGHIMLT DFDLSLRCNV NPTLLKSSSS TMEPTRMMSG PCKESSCIDP LCIEPSCEVP CFSPRFLPAA ARTRKLKSEL
701: AAQVRSLPQL VAEPTDARSN SFVGTHEYLA PEIIKGEGHG SAVDWWTFGV FLYELLYGKT PFKGSGNDET LANVVLQSLK FPDNPIISFQ ARDLIRGLLM
801: KEPENRLGSE RGAAEIKQHP FFEGLNWALI RCTIPPELPE FGEFGLMTVA SQQKESKYLE FELF

Best Arabidopsis Sequence Match ( AT2G36350.1 )
(BLAST)

001: MESFAGSCEI VEEKDAVRLA KHSSRYCMSP LGSSKDMEQR PALKSGYQGS MEYDIDQLFQ SITIKPSPRR VMGSSFHHLE TSASAGTSRS TSPSNKGAMK
101: KPFPMGTPRS PRVGPSDSIS LKQALRDLCI SKASEMASQK RLSKSAAASP RVSEADRIKT LYRQVLNESA GKPGLPVDKG KSLVEISLTP VVDIPSSSQS
201: VPQRYDVLET EPSNFISEPS QAEILLHVLG NGSGIKTVGY GMLETVSLCK SNKSGSCLSS GSGDYEIEID ENHTSPPHMV IEDQLVEIDK HVTSLPSCSG
301: SKVDTEELDK SIVSSARVKS EPTALSSGLK GKLDNFPGSG TEKSKLVSKV TRNIPRPKPR PKKKILLKKK LKIVVNSATK MVEEVDTSLE PSASQLLCQK
401: CHCAVKSTST ENHPPSNTSH TTDKNVSIEA DQESLASPRL IRIVKCNKEA SKGSSDSCEV SDSGEAVIVM KQEVSPSNYS GKGDADEQIR ANPTSSEKFD
501: FSLSSKNSLG DYSSSTSMSE ESNLSRFSCG NKPHMSMDVR WEAVKHVKLQ YGSLGLRHFN LLKKLGCGDI GTVYLAELVG TNCLFAIKVM DNEFLARRKK
601: TPRAQAERAI LKMLDHPFLP TLYAQFTSDN LSCLVMEYCP GGDLHVLRQK QLSRCFSEPA TRFYVAEILL ALEYLHMLGV IYRDLKPENI LVREDGHIML
701: TDFDLSLRCA VNPTLLRSTS PPEKDPARMS GPYSTSNCIQ PLCIEPSCRV PCFSPRLLST QARNQKPRKP KRPDLLTQQF RSLPQLVAEP TEARSNSFVG
801: THEYLAPEII KGEGHGAAVD WWTFGVLLYE LLYGKTPFKG YDNEETLSNV VYQNLKFPDS PLVSFQAKEL IRRLLVKDPE SRLGSEKGAA EIKRHPFFEG
901: LNWALIRCAI PPELPDIYDN GATEATSPEG NNRYLECKAI GDHLEFELF

Arabidopsis Description

KIPK2Serine/threonine-protein kinase KIPK2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJM3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.