Factsheet for VIT_10s0116g00440.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
vacuole 1
mitochondrion 2
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_13s0074g00100.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G47750.1	VIT_13s0074g00100.t01	AT5G04510.1	16973627

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P22450_001	Banana	cytosol	46.61	83.05
VIT_19s0015g00770.t01	Wine grape	extracellular	80.65	81.83
KRH36626	Soybean	cytosol	78.23	79.77
KRH11623	Soybean	cytosol	75.65	79.36
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	39.84	78.41
Bra024918.1-P	Field mustard	cytosol	69.03	77.26
CDY17708	Canola	cytosol	69.03	77.26
AT5G47750.1	Thale cress	cytosol, plastid	72.74	76.96
CDX77795	Canola	cytosol	70.81	76.88
GSMUA_Achr1P09470_001	Banana	cytosol	55.48	73.35
Os09t0258500-01	Rice	cytosol, plasma membrane	66.77	73.02
GSMUA_Achr4P06290_001	Banana	cytosol	54.35	72.63
TraesCS5A01G170100.1	Wheat	cytosol	66.61	72.08
HORVU5Hr1G052250.1	Barley	cytosol	66.61	71.95
TraesCS5D01G174500.1	Wheat	cytosol	66.45	71.9
TraesCS5B01G166900.1	Wheat	cytosol	66.13	71.55
Os08t0491200-01	Rice	cytosol	68.55	71.55
Os09t0478500-01	Rice	cytosol	67.1	71.36
TraesCS5A01G253500.1	Wheat	cytosol	65.65	70.54
Zm00001d005135_P001	Maize	cytosol	65.0	70.45
TraesCS5D01G261300.1	Wheat	cytosol	65.32	70.19
HORVU5Hr1G071250.1	Barley	cytosol	65.16	70.02
Zm00001d005976_P008	Maize	cytosol	65.16	70.02
TraesCS5B01G252500.1	Wheat	cytosol	65.16	70.02
KXG35854	Sorghum	cytosol	64.68	69.5
Zm00001d020858_P001	Maize	cytosol	64.52	69.32
GSMUA_AchrUn_...	Banana	cytosol	55.32	69.29
Os06t0291600-01	Rice	nucleus	65.65	69.1
GSMUA_Achr8P25360_001	Banana	cytosol	58.23	68.89
OQU85494	Sorghum	plastid	63.39	68.71
TraesCS7B01G123400.1	Wheat	cytosol	64.03	68.69
Os02t0725000-01	Rice	cytosol	65.0	68.54
TraesCS7D01G218000.1	Wheat	cytosol, plastid	63.87	68.51
TraesCS7A01G216200.1	Wheat	cytosol, plastid	63.87	68.51
EES15458	Sorghum	cytosol	66.61	68.49
HORVU7Hr1G043790.1	Barley	plastid	63.06	67.41
GSMUA_Achr7P20130_001	Banana	nucleus	56.77	67.3
VIT_19s0085g01140.t01	Wine grape	cytosol	47.74	67.12
GSMUA_Achr4P13100_001	Banana	cytosol	49.68	66.09
GSMUA_Achr5P04290_001	Banana	cytosol	53.06	66.06
KXG19822	Sorghum	cytosol, plastid	60.48	64.43
VIT_14s0066g02140.t01	Wine grape	cytosol	51.13	58.92
VIT_14s0066g00460.t01	Wine grape	cytosol, plastid	62.9	57.52
Zm00001d017889_P001	Maize	nucleus	36.29	57.25
VIT_13s0074g00730.t01	Wine grape	cytosol	30.32	54.34
VIT_15s0021g01540.t01	Wine grape	cytosol	58.71	51.12
VIT_06s0061g01560.t01	Wine grape	nucleus	36.94	50.89
VIT_11s0016g04910.t01	Wine grape	nucleus, plastid	38.39	50.64
VIT_10s0003g04320.t01	Wine grape	cytosol, plastid	32.74	45.01
VIT_19s0027g00020.t01	Wine grape	nucleus, plastid	32.42	42.41
VIT_06s0061g01540.t01	Wine grape	cytosol	50.48	35.61
VIT_08s0007g03600.t01	Wine grape	cytosol	48.39	34.72

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100854807	wikigene:100854807	MapMan:18.4.6.5	Gene3D:3.30.200.20	ProteinID:CCB48446
ProteinID:CCB48446.1	UniProt:F6H8A3	EMBL:FN595294	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
EntrezGene:LOC100854807	wikigene:LOC100854807	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351
PANTHER:PTHR24351:SF165	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TIGR:TC64308
UniParc:UPI000210A9B4	ArrayExpress:VIT_10s0116g00440	EnsemblPlantsGene:VIT_10s0116g00440	EnsemblPlants:VIT_10s0116g00440.t01	unigene:Vvi.6183	RefSeq:XP_003634855
RefSeq:XP_003634855.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr10_random:-:206723..210801

Molecular Weight (calculated)

67411.1 Da

IEP (calculated)

8.417

GRAVY (calculated)

-0.340

Length

620 amino acids

Sequence
(BLAST)

001: MASKSCSKSS SQQRKLTSGA QAVGANELKP LPLEVSKTSK PELVSTEQKS VQTTPKQVTV EASEIKKSPT SGQKGSADLL PIKFDSSSSS AGAEQASTEV
101: DPSVNGSRGS LEASVDQEKK TSEYGSVKDS SVSAKVSDGA SSLAKTSGSA KVSDRGDFVE SGKSSMCRGS TSSDVSDEST CSSFSSSINK PHKANDSRWE
201: AIQAVRARDG VLGLSHFRLL KRLGCGDIGS VYLSELSGTK SYFAMKVMDK GSLASRKKLL RAQTEREILQ SLDHPFLPTL YTHFETEKFS CLVMEFCPGG
301: DLHTLRQRQP GKHFTEQAVK FYVAEVLLAL EYLHMLGIVY RDLKPENVLV RDDGHIMLSD FDLSLRCAVS PTLVKTCSLE SDPFRKNPVY CVQPACIEPS
401: CIQPSCVAPT TCFTPRLFSS KSRKDRKPKN EVGNQVSPLP ELIAEPTGAR SMSFVGTHEY LAPEIIKGEG HGSAVDWWTF GIFLYELLFG KTPFKGSGNR
501: ATLFNVVGQP LRFPESPVVS FSARDLIRGL LVKEPQHRLA FKRGATEIKQ HPFFEGVNWA LIRCATPPEI PKPVEIERIP APTASTSEKV PPAAKATAPI
601: AAAVVPDQKS SDNYLEFDFF

Best Arabidopsis Sequence Match ( AT5G47750.1 )
(BLAST)

001: MASTRKPSGH GAEVEAQKRS SSNSSTKSAK AETFEPMQLQ RSVTNPRAVG IPESKRLPES FRKRSSDPAV CKPDFSSLST VLEHVDSLTI DEKKTSGFGS
101: VKTSSASAKL SDGTSSLGKT SGSAKLSGRL DFMESGKSSI CRGSTSSDVS DESSCSSFSS TVNKPHKAND LRWEAIQAVR VRDGLLGLSH FRLLKRLGCG
201: DIGSVYLSEL SGTKCYFAMK VMDKTSLASR KKLLRAQTER EILQSLDHPF LPTLYTHFET EKFSCLVMEF CPGGDLHTLR QRQPGKHFSE QAVKFYIAES
301: LLALEYLHML GIVYRDLKPE NVLVREDGHI MLSDFDLSLR CLVSPTLVKS AAIESDPLRK NVYCVQPACI EPSCIQPSCT VPTTCFSPRL FSSKSKKDRK
401: PKNDTANQVR PLPELVAEPT DARSMSFVGT HEYLAPEIIK GEGHGSAVDW WTFGIFLYEL LFGRTPFKGS GNRQTLFNVV GQPLRFPETP VVSFAARDLI
501: RGLLMKEPQQ RLGFKRGATE VKQHPFFEGV NWALIRCATP PEIPKPVELE KGAVSVAEAP SSQKTAAGLV LNAQKGSDNY LEFDFF

Arabidopsis Description

D6PKL2Serine/threonine-protein kinase D6PKL2 [Source:UniProtKB/Swiss-Prot;Acc:Q39183]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.