Factsheet for GSMUA_Achr7P20130_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
vacuole 1
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr5P26030_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G47750.1	GSMUA_Achr10P...	AT5G04510.1	16973627
AT5G47750.1	GSMUA_Achr5P26030_001	AT5G04510.1	16973627

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	41.87	69.52
GSMUA_Achr5P22450_001	Banana	cytosol	46.08	69.25
GSMUA_Achr1P09470_001	Banana	cytosol	56.98	63.54
GSMUA_Achr5P00910_001	Banana	extracellular	34.03	62.9
GSMUA_AchrUn_...	Banana	cytosol	59.27	62.63
GSMUA_Achr4P06290_001	Banana	cytosol	55.45	62.5
GSMUA_Achr5P04290_001	Banana	cytosol	59.08	62.05
GSMUA_Achr4P13100_001	Banana	cytosol	53.35	59.87
GSMUA_Achr8P25360_001	Banana	cytosol	59.27	59.16
VIT_19s0015g00770.t01	Wine grape	extracellular	69.02	59.08
Bra024918.1-P	Field mustard	cytosol	60.99	57.58
CDY17708	Canola	cytosol	60.99	57.58
Solyc07g065710.2.1	Tomato	plastid	65.77	56.95
KRH36626	Soybean	cytosol	66.16	56.91
VIT_10s0116g00440.t01	Wine grape	plastid	67.3	56.77
PGSC0003DMT400057021	Potato	plastid	65.2	56.46
CDX77795	Canola	cytosol	61.38	56.22
PGSC0003DMT400022397	Potato	plastid	65.58	55.95
KRH11623	Soybean	cytosol	63.1	55.84
Solyc10g005770.2.1	Tomato	plastid	64.82	55.3
AT5G47750.1	Thale cress	cytosol, plastid	61.57	54.95
GSMUA_Achr3P16430_001	Banana	cytosol	34.8	52.45
GSMUA_Achr6P17280_001	Banana	cytosol, plastid	28.11	50.0
Zm00001d017889_P001	Maize	nucleus	37.09	49.36
GSMUA_Achr7P06890_001	Banana	cytosol	49.33	47.78
GSMUA_Achr1P00540_001	Banana	cytosol	47.61	47.52
GSMUA_Achr5P12590_001	Banana	cytosol	47.99	47.36
GSMUA_Achr10P...	Banana	cytosol, plastid	29.06	47.35
GSMUA_Achr2P19230_001	Banana	cytosol	42.45	47.23
GSMUA_AchrUn_...	Banana	cytosol	46.46	46.46
GSMUA_Achr10P...	Banana	nucleus	36.14	45.99
GSMUA_Achr7P01120_001	Banana	nucleus	35.18	43.5
GSMUA_Achr7P09970_001	Banana	nucleus	35.18	43.5
GSMUA_Achr5P02480_001	Banana	nucleus	33.65	37.77
GSMUA_Achr5P06950_001	Banana	cytosol, mitochondrion	47.04	36.02
GSMUA_Achr4P21830_001	Banana	cytosol	29.64	34.91
GSMUA_Achr4P18040_001	Banana	cytosol	30.02	34.81
GSMUA_Achr10P...	Banana	cytosol	43.59	32.95
GSMUA_Achr11P...	Banana	cytosol	41.68	30.4
GSMUA_Achr6P13320_001	Banana	cytosol	42.06	30.3
GSMUA_Achr8P16090_001	Banana	nucleus	41.11	28.48

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.6.5	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr7G20130_001
EnsemblPlants:GSMUA_Achr7P20130_001	EnsemblPlants:GSMUA_Achr7T20130_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0TJ50	PFAM:PF00069
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351	PANTHER:PTHR24351:SF112	InterPro:Prot_kinase_dom	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002959749	SEG:seg	:	:

Description

Serine/threonine protein kinase, putative [Source:GMGC_GENE;Acc:GSMUA_Achr7G20130_001]

Coordinates

chr7:-:23111427..23115189

Molecular Weight (calculated)

58284.1 Da

IEP (calculated)

8.918

GRAVY (calculated)

-0.559

Length

523 amino acids

Sequence
(BLAST)

001: MASKATSSNR SEKQVKTPGN QKVKPNFPHT KHVAKPSKSE PTASKNLVAV GESMTKHILS EVSENKEPNH SLKDTIDSIT DKVRSTVMLS SENNDMNPSS
101: DGWKQPTQRA DSIEPSGTII LEGNGDQEKK SEHGANNGIV SAKASVEDNS ITRASEGAKI SDKADVIENR KSSMCRPSTS SDISDESSCS SLSSSITKPH
201: KGNDSRWEAI QVIRARDGFL ELSGTKSYFA MKVMDKGSLA SRKKLLRAQT EREILQCLDH PFLPTLYTHF ETDKFSCLVM EFCPGGDLHT LRQRQPGKYF
301: SEQAVKFYVA EVLLALEYLH MLGIIYRDLK PENVLVREDG HIMLSDFDLS LRCVVSPTLI KSSNPKSESS RKNNPVYCSK KDRKSKTEIG NQVSPLPELI
401: AEPTDARSMS FVGTHEYLAP EIIKGEGHGS AVDWWTFGIF LYELLFGKTP FKGSGNRATL FNVIGQPLRF PDSPIVSFSA RDLIRGLLVK EPQHRLAYKR
501: GATEIKQHPF FEGYPFRNLI NYF

Best Arabidopsis Sequence Match ( AT5G47750.1 )
(BLAST)

001: MASTRKPSGH GAEVEAQKRS SSNSSTKSAK AETFEPMQLQ RSVTNPRAVG IPESKRLPES FRKRSSDPAV CKPDFSSLST VLEHVDSLTI DEKKTSGFGS
101: VKTSSASAKL SDGTSSLGKT SGSAKLSGRL DFMESGKSSI CRGSTSSDVS DESSCSSFSS TVNKPHKAND LRWEAIQAVR VRDGLLGLSH FRLLKRLGCG
201: DIGSVYLSEL SGTKCYFAMK VMDKTSLASR KKLLRAQTER EILQSLDHPF LPTLYTHFET EKFSCLVMEF CPGGDLHTLR QRQPGKHFSE QAVKFYIAES
301: LLALEYLHML GIVYRDLKPE NVLVREDGHI MLSDFDLSLR CLVSPTLVKS AAIESDPLRK NVYCVQPACI EPSCIQPSCT VPTTCFSPRL FSSKSKKDRK
401: PKNDTANQVR PLPELVAEPT DARSMSFVGT HEYLAPEIIK GEGHGSAVDW WTFGIFLYEL LFGRTPFKGS GNRQTLFNVV GQPLRFPETP VVSFAARDLI
501: RGLLMKEPQQ RLGFKRGATE VKQHPFFEGV NWALIRCATP PEIPKPVELE KGAVSVAEAP SSQKTAAGLV LNAQKGSDNY LEFDFF

Arabidopsis Description

D6PKL2Serine/threonine-protein kinase D6PKL2 [Source:UniProtKB/Swiss-Prot;Acc:Q39183]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.