Factsheet for PGSC0003DMT400022397

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
vacuole 1
mitochondrion 1
cytosol 2
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400043552
PGSC0003DMT400070360

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G47750.1	PGSC0003DMT400043552	AT5G04510.1	16973627
AT5G47750.1	PGSC0003DMT400070360	AT5G04510.1	16973627

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g005770.2.1	Tomato	plastid	97.72	97.72
PGSC0003DMT400057021	Potato	plastid	83.36	84.6
GSMUA_Achr5P22450_001	Banana	cytosol	45.35	79.89
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	39.64	77.14
VIT_19s0015g00770.t01	Wine grape	extracellular	76.35	76.6
KRH36626	Soybean	cytosol	74.23	74.84
Bra024918.1-P	Field mustard	cytosol	67.37	74.55
CDY17708	Canola	cytosol	67.37	74.55
KRH11623	Soybean	cytosol	71.78	74.45
CDX77795	Canola	cytosol	68.68	73.73
AT5G47750.1	Thale cress	cytosol, plastid	70.15	73.38
PGSC0003DMT400050818	Potato	cytosol	72.27	72.98
Os09t0258500-01	Rice	cytosol, plasma membrane	65.25	70.55
TraesCS5A01G170100.1	Wheat	cytosol	65.58	70.16
TraesCS5D01G174500.1	Wheat	cytosol	65.58	70.16
GSMUA_Achr4P06290_001	Banana	cytosol	53.02	70.04
TraesCS5B01G166900.1	Wheat	cytosol	65.42	69.98
HORVU5Hr1G052250.1	Barley	cytosol	65.42	69.86
Os08t0491200-01	Rice	cytosol	67.54	69.7
GSMUA_Achr1P09470_001	Banana	cytosol	53.18	69.51
Os09t0478500-01	Rice	cytosol	66.07	69.47
TraesCS5A01G253500.1	Wheat	cytosol	65.09	69.15
TraesCS5D01G261300.1	Wheat	cytosol	64.93	68.98
HORVU5Hr1G071250.1	Barley	cytosol	64.93	68.98
TraesCS5B01G252500.1	Wheat	cytosol	64.76	68.8
Os02t0725000-01	Rice	cytosol	65.58	68.37
TraesCS7A01G216200.1	Wheat	cytosol, plastid	64.27	68.17
TraesCS7D01G218000.1	Wheat	cytosol, plastid	64.27	68.17
TraesCS7B01G123400.1	Wheat	cytosol	64.27	68.17
KXG35854	Sorghum	cytosol	64.11	68.11
GSMUA_AchrUn_...	Banana	cytosol	54.98	68.08
Zm00001d005976_P008	Maize	cytosol	63.95	67.94
Zm00001d020858_P001	Maize	cytosol	63.78	67.76
Os06t0291600-01	Rice	nucleus	65.09	67.74
HORVU7Hr1G043790.1	Barley	plastid	63.95	67.59
Zm00001d005135_P001	Maize	cytosol	62.97	67.48
EES15458	Sorghum	cytosol	65.42	66.5
OQU85494	Sorghum	plastid	61.66	66.08
GSMUA_Achr7P20130_001	Banana	nucleus	55.95	65.58
GSMUA_Achr8P25360_001	Banana	cytosol	55.79	65.27
GSMUA_Achr5P04290_001	Banana	cytosol	52.69	64.86
GSMUA_Achr4P13100_001	Banana	cytosol	49.27	64.81
PGSC0003DMT400025008	Potato	cytosol	47.47	64.67
KXG19822	Sorghum	cytosol, plastid	59.71	62.89
PGSC0003DMT400003557	Potato	cytosol, plastid	51.39	60.58
PGSC0003DMT400032816	Potato	cytosol	59.38	57.69
Zm00001d017889_P001	Maize	nucleus	36.05	56.23
PGSC0003DMT400017808	Potato	cytosol, plastid	58.56	53.9
PGSC0003DMT400067034	Potato	cytosol	57.75	50.57
PGSC0003DMT400053292	Potato	cytosol, plastid	38.01	50.22
PGSC0003DMT400068252	Potato	nucleus	36.54	47.36
PGSC0003DMT400050201	Potato	cytosol	35.56	47.29
PGSC0003DMT400068494	Potato	cytosol	52.37	45.66
PGSC0003DMT400079838	Potato	nucleus	31.81	40.54
PGSC0003DMT400068291	Potato	cytosol	49.76	36.4
PGSC0003DMT400018337	Potato	cytosol	48.78	35.05
PGSC0003DMT400072395	Potato	nucleus	47.15	28.76
PGSC0003DMT400006862	Potato	cytosol	47.8	28.73

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102579874	MapMan:18.4.6.5	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1AGN2	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400008686	PGSC:PGSC0003DMG400008686
EnsemblPlants:PGSC0003DMT400022397	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351	PANTHER:PTHR24351:SF112	InterPro:Prot_kinase_dom
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002962E87	RefSeq:XP_006352558.1	RefSeq:XP_006352559.1
RefSeq:XP_006352560.1	RefSeq:XP_006352561.1	SEG:seg	:	:	:

Description

Serine/threonine protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400008686]

Coordinates

chr10:-:828983..833087

Molecular Weight (calculated)

67305.9 Da

IEP (calculated)

8.736

GRAVY (calculated)

-0.415

Length

613 amino acids

Sequence
(BLAST)

001: MASTPSVKSS LEKLNKSAGI QAVERNPRRS APSQVSKSSN SGSTTSKELQ HNDREVASKQ LMAEATTKKK SNSYQQVGSA DLLVDKFDSS LYLGNLKHAP
101: SSAASAPCEA KGSQCAIDQE KKASENGAVK DNSASAKVSD GAGSLAKTSG SAKVSDRADF VESGKSSICR GSTSTDVSDE STCSSFSTSI NKPHKANDSR
201: WEAIQAIRAK DGTLDLRHFR LLKKLGSGDI GSVYLSELCG TKCYFAMKVM DKASLAGRKK LLRAQTEREI LQSLDHPFLP TLYTHFETEK FSCLVMEFCP
301: GGDLHTLRQR QPGKHFSEQA VKFYVAEILL AMEYLHMLGI VYRDLKPENV LVREDGHIML SDFDLSLRCT VSPTLVKLSS LDVEPLRKNS GYCVQPACIE
401: PSCIQPSCAV TTTCFGPRFF SSKSKKEKKS KNDTGNQVSP LPELMAEPTG ARSMSFVGTH EYLAPEIIKG EGHGSAVDWW TFGIFLYELL FGKTPFKGSG
501: NRATLFNVVG QPLRFPESPV VSFSARDLIR GLLVKEPQNR LAYKRGATEI KQHPFFEGVN WALIRCASPP EIPRPVEFER ISAQQPSSTS EKPVAVTVQY
601: QQKSDNYLEF DFF

Best Arabidopsis Sequence Match ( AT5G47750.1 )
(BLAST)

001: MASTRKPSGH GAEVEAQKRS SSNSSTKSAK AETFEPMQLQ RSVTNPRAVG IPESKRLPES FRKRSSDPAV CKPDFSSLST VLEHVDSLTI DEKKTSGFGS
101: VKTSSASAKL SDGTSSLGKT SGSAKLSGRL DFMESGKSSI CRGSTSSDVS DESSCSSFSS TVNKPHKAND LRWEAIQAVR VRDGLLGLSH FRLLKRLGCG
201: DIGSVYLSEL SGTKCYFAMK VMDKTSLASR KKLLRAQTER EILQSLDHPF LPTLYTHFET EKFSCLVMEF CPGGDLHTLR QRQPGKHFSE QAVKFYIAES
301: LLALEYLHML GIVYRDLKPE NVLVREDGHI MLSDFDLSLR CLVSPTLVKS AAIESDPLRK NVYCVQPACI EPSCIQPSCT VPTTCFSPRL FSSKSKKDRK
401: PKNDTANQVR PLPELVAEPT DARSMSFVGT HEYLAPEIIK GEGHGSAVDW WTFGIFLYEL LFGRTPFKGS GNRQTLFNVV GQPLRFPETP VVSFAARDLI
501: RGLLMKEPQQ RLGFKRGATE VKQHPFFEGV NWALIRCATP PEIPKPVELE KGAVSVAEAP SSQKTAAGLV LNAQKGSDNY LEFDFF

Arabidopsis Description

D6PKL2Serine/threonine-protein kinase D6PKL2 [Source:UniProtKB/Swiss-Prot;Acc:Q39183]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.