Factsheet for PGSC0003DMT400068252

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
vacuole 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g067080.1.1	Tomato	nucleus	95.35	97.62
VIT_06s0061g01560.t01	Wine grape	nucleus	76.32	80.22
KRH26592	Soybean	nucleus	70.19	73.29
GSMUA_Achr6P17280_001	Banana	cytosol, plastid	45.03	72.45
Bra019427.1-P	Field mustard	cytosol, plastid	67.02	71.88
CDY08710	Canola	cytosol, plastid	66.6	71.43
AT3G44610.1	Thale cress	cytosol, plastid	67.23	70.51
GSMUA_Achr10P...	Banana	cytosol, plastid	47.36	69.78
KRH30493	Soybean	cytosol, plastid	64.27	68.93
KRH25188	Soybean	nucleus, plastid	63.42	68.81
KRH22717	Soybean	nucleus	70.61	67.2
Os12t0149700-01	Rice	cytosol	46.09	64.5
Os11t0150700-00	Rice	cytosol, plastid	59.41	61.35
TraesCS5D01G137200.1	Wheat	plastid	59.62	60.39
TraesCS5B01G128400.1	Wheat	plastid	58.99	59.74
PGSC0003DMT400050201	Potato	cytosol	58.14	59.65
TraesCS5A01G129700.1	Wheat	plastid	59.41	59.03
Zm00001d052523_P001	Maize	nucleus, plastid	60.25	55.66
EES07987	Sorghum	nucleus, plastid	59.2	53.85
HORVU5Hr1G041960.1	Barley	plastid	59.83	53.7
PGSC0003DMT400025008	Potato	cytosol	46.09	48.44
PGSC0003DMT400053292	Potato	cytosol, plastid	42.49	43.32
PGSC0003DMT400003557	Potato	cytosol, plastid	47.15	42.88
PGSC0003DMT400057021	Potato	plastid	48.63	38.08
PGSC0003DMT400050818	Potato	cytosol	47.78	37.23
PGSC0003DMT400079838	Potato	nucleus	37.21	36.59
PGSC0003DMT400022397	Potato	plastid	47.36	36.54
PGSC0003DMT400032816	Potato	cytosol	48.2	36.13
PGSC0003DMT400017808	Potato	cytosol, plastid	47.57	33.78
PGSC0003DMT400067034	Potato	cytosol	46.93	31.71
PGSC0003DMT400068494	Potato	cytosol	43.55	29.3
PGSC0003DMT400018337	Potato	cytosol	46.3	25.67
PGSC0003DMT400068291	Potato	cytosol	43.97	24.82
PGSC0003DMT400072395	Potato	nucleus	45.24	21.29
PGSC0003DMT400006862	Potato	cytosol	45.45	21.08

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102598952	Gene3D:3.30.200.20	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1CIP3	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400026531	PGSC:PGSC0003DMG400026531
EnsemblPlants:PGSC0003DMT400068252	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351	PANTHER:PTHR24351:SF104	InterPro:Prot_kinase_dom
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000295F63A	RefSeq:XP_006349105.1	SEG:seg

Description

Protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400026531]

Coordinates

chr11:+:39933974..39940511

Molecular Weight (calculated)

52089.0 Da

IEP (calculated)

6.674

GRAVY (calculated)

-0.227

Length

473 amino acids

Sequence
(BLAST)

001: MEPWLDDLAD DLQSISFNST TSTTTTTATD INRSTSSGSE ATWTATASSI SSNSLHHHIT KPRAATPSGD PYWDAITRGI STSTSSAISL TDLRFLHRLG
101: SGDIGSVFLA EIKAAPVTEI SKSKEVSAYF AAKVMDKKEL ASRNKEGRAR TEREILEMLD HPFLPTLYAS IDSPKWSCLL TEFCPGGDLH VLRQRQPAKR
201: FPESAVRFYV SEVVVALEYI HMMGIVYRDL KPENVLVRSD GHIMLTDFDL SLKCDTSTST PAQVISSQNT PNGGPQQNEY KIEPPKFTAS SCILPNCIVP
301: AVSCFHPKRK RKKKLGHLGG PEFVAEPVDV RSMSFVGTHE YLAPEIVSGE GHGSAVDWWT LGIFIFELLY GVTPFKGIDH ELTLANIVAR ALEFPKEPSM
401: PAPVKDLISQ LLTKDPARRM GSTMGATAIK HHPFFQGVNW ALLRCTSPPF IPPPFSKEFL SDGSCPDTSM EYY

Best Arabidopsis Sequence Match ( AT3G44610.1 )
(BLAST)

001: MEPWIDELTD DLQSVSFTSA GTTVNRSTSS GSRSSSSAAA LTPAPSAHGS FSSSKLPPSL RSSLSLSDLR FRLRLGSGDI GSVFLAEFKS LTAVTETTAV
101: KLPLLAAKVM DKKELASRSK EGRAKTEREI LESLDHPFLP TLYAAIDSPK WLCLLTEFCP GGDLHVLRQK QTHKRFHESA VRFYVSEVIV AIEYLHMLGI
201: VYRDLKPENV LVRSDGHIML TDFDLSLKCD ESTSTPQIVL NRNNLPNGSS DQNENQGMDH RQTTSSSCMI PNCIVPAVSC FHPRIRRRKK KTDHRNNGPE
301: LVAEPVDVRS MSFVGTHEYL APEIVSGEGH GSAVDWWTLG IFMFELFYGT TPFKGMDHEL TLANIVARAL EFPKEPTIPS AAKDLISQLL AKDPSRRLGS
401: SLGATAVKRH PFFQGVNWAL LMCTRPPFLP PPFRKELLSD DICPETHVDY Y

Arabidopsis Description

At3g44610 [Source:UniProtKB/TrEMBL;Acc:Q0V7S5]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.